Functional redundancy and/or ongoing pseudogenization among F-box protein genes expressed in Arabidopsis male gametophyte.

Plant Reprod

Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, Route de Saint-Cyr (RD 10), 78026, Versailles Cedex, France.

Published: June 2014

AI Article Synopsis

  • F-box protein genes constitute one of the largest gene families in plants, with around 700 genes identified in Arabidopsis, playing a critical role in protein degradation via the ubiquitin proteasome system.
  • Half of these genes are expressed during male gametogenesis, particularly in microspores and pollen, prompting a study of 34 F-box genes highly active in pollen to determine their specific roles.
  • Analysis of selected genes confirmed pollen-specific expression in only 10 of 34 genes, and while 11 out of 24 mutant lines were null mutants, their mutations did not affect reproduction, indicating redundancy or non-essential functions among these F-box proteins.

Article Abstract

F-box protein genes family is one of the largest gene families in plants, with almost 700 predicted genes in the model plant Arabidopsis. F-box proteins are key components of the ubiquitin proteasome system that allows targeted protein degradation. Transcriptome analyses indicate that half of these F-box protein genes are found expressed in microspore and/or pollen, i.e., during male gametogenesis. To assess the role of F-box protein genes during this crucial developmental step, we selected 34 F-box protein genes recorded as highly and specifically expressed in pollen and isolated corresponding insertion mutants. We checked the expression level of each selected gene by RT-PCR and confirmed pollen expression for 25 genes, but specific expression for only 10 of the 34 F-box protein genes. In addition, we tested the expression level of selected F-box protein genes in 24 mutant lines and showed that 11 of them were null mutants. Transmission analysis of the mutations to the progeny showed that none of the single mutations was gametophytic lethal. These unaffected transmission efficiencies suggested leaky mutations or functional redundancy among F-box protein genes. Cytological observation of the gametophytes in the mutants confirmed these results. Combinations of mutations in F-box protein genes from the same subfamily did not lead to transmission defect either, further highlighting functional redundancy and/or a high proportion of pseudogenes among these F-box protein genes.

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http://dx.doi.org/10.1007/s00497-014-0243-1DOI Listing

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