In the present paper, we provide an extended study of the vibrational signature of a butenolide carotenoid, peridinin, in various solvents by combining resonance Raman spectroscopy (RRS) with theoretical calculations. The presence of a Fermi resonance due to coupling between the lactonic C═O stretching and the overtone of the wagging of the C-H in the lactonic ring provides a spectroscopic way of differentiating between peridinins lying in different environments. This is a significant achievement, given that simultaneous presence of several peridinins (each with a peculiar photophysical role) in different environments occurs in the most important peridinin containing proteins, the peridinin-chlorophyll proteins (PCPs) and the Chl a-c2-peridinin binding proteins. In RRS, small modifications of solvent polarity can give rise to large differences in the intensity and splitting between the two bands, resulting from the Fermi resonance. By changing the polarity, we can tune the frequency of stretching of the C═O and, while the C-H wagging frequency is almost always constant in different solvents, move the system from a perfect resonance condition to off-resonance ones. We have corroborated our spectroscopic findings with a quasi-classical dynamical model of two coupled oscillators, and DFT calculations on peridinin in different solvents; we have also used calculations to complete the peridinin vibrational mode assignments in the 800-1600 cm(-1) region of RRS spectra, corresponding to polyene chain motion. Finally, the presence of Fermi resonance has been used to reinterpret previous vibrational spectroscopic experiments in PCPs.
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Acc Chem Res
January 2025
The Wolfson Catalysis Centre, Department of Chemistry, University of Oxford, Oxford OX1 3QR, U.K.
ConspectusThe discovery of reversible hydrogenation using metal-free phosphoborate species in 2006 marked the official advent of frustrated Lewis pair (FLP) chemistry. This breakthrough revolutionized homogeneous catalysis approaches and paved the way for innovative catalytic strategies. The unique reactivity of FLPs is attributed to the Lewis base (LB) and Lewis acid (LA) sites either in spatial separation or in equilibrium, which actively react with molecules.
View Article and Find Full Text PDFJ Phys Chem Lett
January 2025
Department of Physics, City University of Hong Kong, Kowloon 999077, Hong Kong, China.
Amines are one of the most ubiquitous functional groups in molecular junctions; however, the exact regulation of the charge transport through the protonation state of an amine group in the junction backbone remains elusive. We address this question here by designing a diphenylamine molecular backbone and experimentally investigating how protonation of the central amine group affects the charge transport. Our ultraviolet-visible spectroscopy measurements demonstrate the protonation reaction of the diphenylamine compound in the presence of either trifluoroacetic acid or HCl, and we observe a consistent trend of a modestly increased conductance for diphenylamine in the presence of acid, indicating that a protonated amine group in a diphenylamine backbone slightly enhances the electron conduction.
View Article and Find Full Text PDFBiosensors (Basel)
January 2025
INFN-Laboratori Nazionali di Frascati, Via E. Fermi 54, 00044 Frascati, Italy.
The COVID-19 pandemic has highlighted the urgent need for rapid, sensitive, and reliable diagnostic tools for detecting SARS-CoV-2. In this study, we developed and optimized a surface plasmon resonance (SPR) biosensor incorporating advanced materials to enhance its sensitivity and specificity. Key parameters, including the thickness of the silver layer, silicon nitride dielectric layer, molybdenum disulfide (MoS) layers, and ssDNA recognition layer, were systematically optimized to achieve the best balance between sensitivity, resolution, and attenuation.
View Article and Find Full Text PDFJ Phys Chem Lett
January 2025
Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako 351-0198, Japan.
Elucidation of the vibrational relaxation process of interfacial water is indispensable for understanding energy dissipation at the aqueous interface. In this study, the vibrational relaxation dynamics of the hydrogen-bonded OH (HB OH) stretch vibration was investigated at the air/isotopically diluted water (HOD-DO) interface by time-resolved heterodyne-detected vibrational sum frequency generation (TR-HD-VSFG) spectroscopy. We observed the temporal change of the excited-state band ( = 1 → 2 transition), which enables a reliable determination of the time of interfacial water.
View Article and Find Full Text PDFJ Phys Chem Lett
January 2025
College of Chemistry, Key Laboratory of Theoretical and Computational Photochemistry, Beijing Normal University, Beijing 100875, China.
The deposition of alkali metals on oxide surfaces has garnered significant interest due to their critical role in enhancing various catalytic processes. However, the atomic-scale characterization of these structures remains elusive, owing to the complex and competing interactions among the oxygen, the alkali metals, and the metal atoms within the oxides. In this work, we grew alkali metals (Na, K, Cs) on the copper oxide films on the Cu(111) surface and found the formation of hexagonally ordered monolayer films.
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