How precise are reported protein coordinate data?

Acta Crystallogr D Biol Crystallogr

The Huck Institute of Genomics, Proteomics and Bioinformatics and the Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.

Published: March 2014

Atomic coordinates in the Worldwide Protein Data Bank (wwPDB) are generally reported to greater precision than the experimental structure determinations have actually achieved. By using information theory and data compression to study the compressibility of protein atomic coordinates, it is possible to quantify the amount of randomness in the coordinate data and thereby to determine the realistic precision of the reported coordinates. On average, the value of each C(α) coordinate in a set of selected protein structures solved at a variety of resolutions is good to about 0.1 Å.

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Source
http://dx.doi.org/10.1107/S1399004713031787DOI Listing

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