Draft Genome Sequence of the Haloacid-Degrading Burkholderia caribensis Strain MBA4.

Genome Announc

Molecular Microbiology Laboratory, School of Biological Sciences, The University of Hong Kong, Hong Kong SAR, China.

Published: February 2014

Burkholderia caribensis MBA4 was isolated from soil for its ability to utilize 2-haloacid. An inducible haloacid operon, encoding a dehalogenase and a permease, is mainly responsible for the biotransformation. Here, we report the draft genome sequence of this strain.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3931356PMC
http://dx.doi.org/10.1128/genomeA.00047-14DOI Listing

Publication Analysis

Top Keywords

draft genome
8
genome sequence
8
burkholderia caribensis
8
sequence haloacid-degrading
4
haloacid-degrading burkholderia
4
caribensis strain
4
strain mba4
4
mba4 burkholderia
4
caribensis mba4
4
mba4 isolated
4

Similar Publications

High-quality draft genomes of six subspecies strains from Cambodian poultry marketplaces were sequenced. The strains were identified as Corvallis-, Monschaui-, and Kentucky-serovars. The fluoroquinolone resistance gene, was found in three strains in different Cambodian provinces.

View Article and Find Full Text PDF

To address food and nutrition security in the face of burgeoning global populations and erratic climatic conditions there is a need to include nutrient dense, climatic resilient but neglected indigenous fruit trees in agrifood systems. Here we present the draft genome sequence of Kei Apple, Dovyalis afra, a neglected indigenous African fruit tree with untapped potential to contribute to nutrient security and improved livelihoods. Our long-read-based genome assembly comprises 440 Mbp sequence across 1190 contigs with a N50 and L50 of 13.

View Article and Find Full Text PDF

sp. nov., a crude oil aggregation-forming anaerobic bacterium isolated from marine sediment.

Int J Syst Evol Microbiol

January 2025

Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, 4-5-7 Konan, Minato, Tokyo 108-8477, Japan.

A crude oil aggregation-forming, strictly anaerobic, Gram-stain-positive, spore-forming, rod-shaped, motile and mesophilic bacterium, named strain SH18-2, was isolated from marine sediment near Sado Island in the Sea of Japan. The temperature, salinity and pH ranges of this strain for the growth were 15-40 °C (optimum 35 °C), 0.5-6.

View Article and Find Full Text PDF

Draft genome sequence of glyphosate-degrading sp. strain GPK 3 (VKM B-2554D) isolated from agricultural soil.

Microbiol Resour Announc

January 2025

G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Federal Research Center, Pushchino, Russia.

The genome of sp. isolated from agricultural soil polluted with the herbicide glyphosate is reported. The genome size is 5.

View Article and Find Full Text PDF

The draft genome sequence of DS1 was isolated for high-acidity vinegar fermentation. The DS1 draft genome has a length of 8,793,442 bp, with 44.27% GC content, 3,053 proteins, 3,169 genes, and 15 genes that play an important role in acetic acid production.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!