In this study, we determined the complete nucleotide sequence of the mitochondrial genome for a cold water fish, Leuciscus idus. The complete mitochondrial genome was sequenced and analyzed using the primer walking method and 30 pairs of newly designed primers were used. Direct sequencing of the PCR products demonstrated that the genome contained the same 37 mitochondrial genes (two ribosomal RNA, 22 transfer RNA and 13 protein-coding genes) and two main non-coding regions (the control region and the origin of the light strand replication) as those found in other vertebrates. Nearly all the protein-coding genes' start codons were ATG except COX 1, meanwhile, the termination codons of which varied with TAA, TA, T, or TAG.
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http://dx.doi.org/10.3109/19401736.2013.873924 | DOI Listing |
Microbiol Resour Announc
January 2025
Institute of Plant Protection and Soil Fertilizer, Hubei Academy of Agricultural Sciences, Wuhan, China.
The complete genome sequence of , a goldthread anthracnose pathogen, was sequenced using PacBio Revio and MGI DNBSEQ-T7 PE150. It contains 10 chromosomes, 5 mini chromosomes, a circular mitochondrial chromosome, and 13,129 genes predicted with RNA-Seq data in a 52.13-Mb genome with an of 5.
View Article and Find Full Text PDFWorld J Clin Oncol
January 2025
Department of Obstetrics and Gynecology, Peking University People's Hospital, Beijing 100044, China.
Background: Mitochondrial genes are involved in tumor metabolism in ovarian cancer (OC) and affect immune cell infiltration and treatment responses.
Aim: To predict prognosis and immunotherapy response in patients diagnosed with OC using mitochondrial genes and neural networks.
Methods: Prognosis, immunotherapy efficacy, and next-generation sequencing data of patients with OC were downloaded from The Cancer Genome Atlas and Gene Expression Omnibus.
Mitochondrial DNA B Resour
January 2025
Department of Wildlife, Fisheries and Aquaculture, Mississippi State University, Mississippi State, Mississippi, USA.
We present a novel mitogenome assembly of the Redlip Shiner, , and assemblies for the Greenhead Shiner, (Cypriniformes: Leuciscidae). Both are charismatic minnows in the taxonomic group and are endemic to the eastern United States. The genome contains 16,711bp and 16,706bp each comprising a total of 13 protein coding genes, 22 tRNAs, two rRNAs, and a control region.
View Article and Find Full Text PDFMitochondrial DNA B Resour
January 2025
Department of Ecology and Institute of Hydrobiology, Jinan University, Guangzhou, China.
is a popular ornamental aquatic plant for aquarists, although only six species are found in China. Destruction of the natural habitats of for human activities has led to a decline in its numbers. In this report, we sequenced and annotated the chloroplast genome for the first time.
View Article and Find Full Text PDFWellcome Open Res
January 2025
Entomology Section, World Museum, Liverpool, England, UK.
We present a genome assembly from a specimen of (tawny cockroach; Arthropoda; Insecta; Blattodea; Ectobiidae). The assembly contains two haplotypes with total lengths of 2,087.55 megabases and 2,124.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!