In soybean, the I gene inhibits pigmentation over the entire seed coat, resulting in yellow seeds. It is thought that this suppression of seed coat pigmentation is due to naturally occurring RNA silencing of chalcone synthase genes (CHS silencing). Fully pigmented seeds can be found among harvested yellow seeds at a very low percentage. These seed coat pigmented (scp) mutants are generated from yellow soybeans by spontaneous recessive mutation of the I gene. A candidate for the I gene, GmIRCHS, contains a perfect inverted repeat (IR) of a CHS pseudogene (pseudoCHS3) and transcripts of GmIRCHS form a double-stranded CHS RNA that potentially triggers CHS silencing. One CHS gene, ICHS1, is located 680 bp downstream of GmIRCHS. Here, the GmIRCHS-ICHS1 cluster was compared in scp mutants of various origins. In these mutants, sequence divergence in the cluster resulted in complete or partial loss of GmIRCHS in at least the pseudoCHS3 region. This result is consistent with the notion that the IR of pseudoCHS3 is sufficient to induce CHS silencing, and further supports that GmIRCHS is the I gene.
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http://dx.doi.org/10.1270/jsbbs.63.384 | DOI Listing |
Plant Physiol
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College of Horticulture, China Agricultural University, Beijing 100193, China.
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View Article and Find Full Text PDFFoods
January 2025
School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, China.
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Crop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
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Department of Plant Biology, College of Biological Sciences, University of California, Davis, CA 95616.
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