Compared to region of interest based DTI analysis, voxel-based analysis gives higher degree of localization and avoids the procedure of manual delineation with the resulting intra and inter-rater variability. One of the major challenges in voxel-wise DTI analysis is to get high quality voxel-level correspondence. For that purpose, current DTI analysis tools are building on nonlinear registration algorithms that deform individual datasets into a template image that is either precomputed or computed as part of the analysis. A variety of matching criteria and deformation schemes have been proposed, but often comparative evaluation is missing. In our opinion, the use of consistent and unbiased measures to evaluate current DTI procedures is of great importance and our work presents two possible measures. Specifically, we propose the evaluation criteria generalization and specificity, originally introduced by the shape modeling community, to evaluate and compare different DTI nonlinear warping results. These measures are of indirect nature and have a population wise view. Both measures incorporate information of the variability of the registration results in the template space via a voxel-wise PCA model. Thus far, we have used these measures to evaluate our own DTI analysis procedure employing fluid-based registration on scalar DTI maps. Generalization and specificity from tensor images in the template space were computed for 8 scalar property maps. We found that for our procedure an intensity-normalized FA feature outperformed the other scalar measurements. Also, using the tensor images rather than the FA maps as a comparison frame seemed to produce more robust results.
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http://dx.doi.org/10.1117/12.844911 | DOI Listing |
Neuroimage
January 2025
College of Artificial Intelligence, Nanjing University of Aeronautics and Astronautics, Nanjing, 211106, China; Key Laboratory of Brain-Machine Intelligence Technology, Ministry of Education, Nanjing University of Aeronautics and Astronautics, Nanjing, 211106, China. Electronic address:
Dynamic brain networks (DBNs) can capture the intricate connections and temporal evolution among brain regions, becoming increasingly crucial in the diagnosis of neurological disorders. However, most existing researches tend to focus on isolated brain network sequence segmented by sliding windows, and they are difficult to effectively uncover the higher-order spatio-temporal topological pattern in DBNs. Meantime, it remains a challenge to utilize the structure connectivity prior in the DBNs analysis.
View Article and Find Full Text PDFBackground: The guidelines recommend anticoagulation management with uninterrupted warfarin or direct thrombin inhibitors (DTIs) during the atrial fibrillation (AF) ablation periprocedural period.
Objectives: To clarify the Japanese real-world latest periprocedural anticoagulation management during AF ablation.
Methods: This multicenter observational study included 6232 consecutive AF patients (68.
J Chem Inf Model
January 2025
School of Computer Science and Technology, Soochow University, Jiangsu 215006, China.
Accurate prediction of drug-target interactions (DTIs) is pivotal for accelerating the processes of drug discovery and drug repurposing. MVCL-DTI, a novel model leveraging heterogeneous graphs for predicting DTIs, tackles the challenge of synthesizing information from varied biological subnetworks. It integrates neighbor view, meta-path view, and diffusion view to capture semantic features and employs an attention-based contrastive learning approach, along with a multiview attention-weighted fusion module, to effectively integrate and adaptively weight the information from the different views.
View Article and Find Full Text PDFNeuroimage
January 2025
Department of Radiology, Columbia University Irving Medical Center, New York, NY, United States; Department of Biomedical Engineering, Columbia University, New York, NY, United States. Electronic address:
Background: The cortical gray matter-white matter interface (GWI) is a natural transition zone where the composition of brain tissue abruptly changes and is a location for pathologic change in brain disorders. While diffusion magnetic resonance imaging (dMRI) is a reliable and well-established technique to characterize brain microstructure, the GWI is difficult to assess with dMRI due to partial volume effects and is normally excluded from such studies.
Methods: In this study, we introduce an approach to characterize the dMRI microstructural profile across the GWI and to assess the sharpness of the microstructural transition from cortical gray matter (GM) to white matter (WM).
Eur Spine J
January 2025
Affiliated Hospital of Integrated Traditional Chinese and Western Medicine, Nanjing University of Chinese Medicine, Nanjing, China.
Background: Intervertebral disc (IVD) degeneration is the main cause of neck pain. Although conventional magnetic resonance imaging can detect morphological changes in intervertebral disc degeneration, it cannot provide accurate and objective evaluations. Magnetic resonance diffusion tensor imaging (DTI) reflects the microstructural changes in tissues by describing the diffusion of water molecules.
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