AI Article Synopsis

  • The study assessed HLA-DPA1 and DPB1 matching in unrelated donor-recipient pairs already matched for other HLA loci (A, B, C, DRB1, DQB1).
  • Out of 76 pairs, the matching rates for HLA-DPA1 and DPB1 were notably low, with 73.7% having at least one incompatible DPA1 allele and 57.9% having at least one incompatible DPB1 allele.
  • The findings suggest that the overall compatibility between donors and recipients in these genes is limited, highlighting the need for further research into the clinical implications of HLA-DPA1 and DPB1 matching in stem cell transplants.

Article Abstract

Objective: To analyze the status of HLA-DPA1 and DPB1 matching for unrelated donor-recipient pairs matched at high-resolution allele level for HLA-A, B, C, DRB1 and DQB1 loci.

Methods: A total of 76 unrelated donor-recipient pairs matching at allele level for HLA-A, B, C, DRB1 and DQB1 loci were subjected to HLA-DPA1 and DPB1 sequence-based typing (SBT). HLA-DPA1and DPB1 matching status at high-resolution allelic level was also analyzed.

Results: The allelic identity ratio for single HLA-DPA1 and DPB1 were 17.1% and 9.2%, respectively. HLA-DPA1 and DPB1 allelic identity ratio were both very low. The majority of unrelated donor-recipient pairs (73.7%) had an incompatibility at 1 HLA-DPA1 allele, 9.2% of pairs had an incompatibility at 2 DPA1 alleles. As for the high-polymorphic HLA-DPB1 gene, 57.9% of studied donor-recipient pairs had an incompatibility at 1 HLA-DPB1 allele, almost 1/3 (32.9%) of them were completely incompatible. When HLA-DPA1 and DPB1 genes were analyzed together, the donor-recipient pairs matched at 2/4 was the most common (51.4%), 4/4 allelic complete matched pairs accounted for 5.6%, and 0/4 matched pairs accounted for 8.3%.

Conclusion: Our results indicated that the ratio of HLA-DPA1 and DPB1 complete match in the unrelated donor-recipient pairs matching at allelic level for HLA-A, B, C, DRB1 and DQB1 loci were very low. The effect of HLA-DPA1 and DPB1 matching status on clinical unrelated stem cell transplantation still needs to be elucidated.

Download full-text PDF

Source
http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2013.06.014DOI Listing

Publication Analysis

Top Keywords

hla-dpa1 dpb1
32
donor-recipient pairs
28
unrelated donor-recipient
20
dpb1 matching
16
level hla-a
16
matching status
12
pairs matched
12
allele level
12
hla-a drb1
12
drb1 dqb1
12

Similar Publications

Introduction of NGS into clinical histocompatibility laboratories has greatly increased the frequency of novel HLA allele discovery. We identified 9 DQA1, 7 DQB1, 8 DPA1 and 2 DPB1 novel alleles over the last 2 years. 92% (24 of 26) differed from their closest allele by single nucleotide substitutions detected in coding regions and 84% (22 of 26) contained polymorphism outside of exon 2.

View Article and Find Full Text PDF

Genome-wide identification of cell type-specific susceptibility genes for Juvenile dermatomyositis through the analysis of N-methyladenosine-associated SNPs.

Autoimmunity

December 2024

Jiangsu Key Laboratory of Preventive and Translational Medicine for Geriatric Diseases, Department of Epidemiology, School of Public Health, Suzhou Medical College of Soochow University, China.

Article Synopsis
  • Genome-wide association studies (GWASs) have identified genetic regions linked to juvenile dermatomyositis (JDM), but the specific functional genes in these regions are still unclear.
  • This study focused on mA-associated SNPs (mA-SNPs) in relevant cell types to determine their impact on gene expression in relation to JDM using bulk tissue and single-cell analyses.
  • Seven mA-SNPs were associated with JDM, revealing differential expression of multiple genes, particularly in myeloid, T, and B cells of JDM patients, highlighting the complex relationship between mA-SNPs and disease susceptibility.
View Article and Find Full Text PDF

Background: Post-traumatic stress disorder (PTSD) is a complex condition triggered by traumatic events. The molecular mechanisms underlying PTSD are not fully understood, but epigenetic modifications, particularly DNA methylation, may play a key role. The objective of this review was to identify the most significant epigenetic markers associated with PTSD.

View Article and Find Full Text PDF

Chronic lymphocytic leukemia (CLL) is a distinct category of lymphoproliferative disorder characterized by the clonal expansion of mature B cells, followed by their accumulation in primary and secondary lymphoid organs. Cluster of differentiation (CD) markers such as CD79b, CD45, CD23, CD22 and CD81 serve as reliable prognostic indicators in CLL as well as the human leukocyte antigen (HLA) with its well-documented associations with various cancers. This study aims to investigate, for the first time, potential connections between HLA typing and CD marker expression in CLL.

View Article and Find Full Text PDF

The Zhejiang Han population, a subgroup of the Southern Han ethnic group, resides in Zhejiang Province, situated on the southeast coast of China. In this study, we conducted HLA genotyping for 813 voluntary umbilical cord blood donors from the Zhejiang Han population, targeting 11 HLA loci, namely HLA-A, HLA-B, HLA-C, HLA-DRB1, HLA-DRB3/4/5, HLA-DQA1, HLA-DQB1, HLA-DPA1, and HLA-DPB1, using the next-generation sequencing method. Our analysis of the alleles and haplotypes revealed a high degree of polymorphism within these loci.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!