Advances in imaging technologies and computational capabilities have made possible novel methods for phenotypic assessments and visualization of detailed anatomical structures of whole embryos. We recently reported a rapid and inexpensive technique for achieving high-resolution virtual histology for phenotyping assessment of mouse embryos (Johnson et al., PLoS Genet 2:e61, 2006). By en bloc staining in a solution of electron-dense osmium tetroxide followed by volumetric X-ray computed tomography, whole embryos can be imaged at isometric resolutions as high as 2.5 μm, depending on the size of the specimen. The datasets generated by these techniques are compatible with state-of-the-art computational methods of organ pattern analysis. This method of Microscopic Computed Tomography (microCT)-based Virtual Histology of embryos allows one to rapidly and accurately phenotype transgenic embryos or to engage in developmental and reproductive toxicology studies of investigational drugs at better resolution, less time, and less expense than traditional histology, magnetic resonance microscopy, or the classical Wilson and Staples procedures.
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http://dx.doi.org/10.1007/978-1-60327-292-6_19 | DOI Listing |
Dig Dis Sci
January 2025
Department of Surgery, Sapienza University of Rome, Rome, Italy.
Nat Commun
January 2025
Digital Biomarkers for Oncology Group, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Accurate melanoma diagnosis is crucial for patient outcomes and reliability of AI diagnostic tools. We assess interrater variability among eight expert pathologists reviewing histopathological images and clinical metadata of 792 melanoma-suspicious lesions prospectively collected at eight German hospitals. Moreover, we provide access to the largest panel-validated dataset featuring dermoscopic and histopathological images with metadata.
View Article and Find Full Text PDFSci Rep
January 2025
Department of Physics, University of Trieste, 34127, Trieste, Italy.
Phase-contrast micro-tomography ([Formula: see text]CT) with synchrotron radiation can aid in the differentiation of subtle density variations in weakly absorbing soft tissue specimens. Modulation-based imaging (MBI) extracts phase information from the distortion of reference patterns, generated by periodic or randomly structured wavefront markers (e.g.
View Article and Find Full Text PDFPLoS One
January 2025
Department of Ophthalmology, University of Washington, Seattle, WA, United States of America.
To investigate macula and optic nerve head (ONH) mitochondrial metabolic activity using flavoprotein fluorescence (FPF) in normal, glaucoma suspect (GS), and open-angle glaucoma (OAG) eyes we performed a cross-sectional, observational study of FPF in normal, GS, and OAG eyes. The macula and ONH of each eye was scanned and analyzed with a commercially available FPF measuring device (OcuMet Beacon, OcuSciences Inc., Ann Arbor, MI).
View Article and Find Full Text PDFPLoS Biol
January 2025
Department of Pharmacology and Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, Cleveland, Ohio, United States of America.
Pathogenic mutations that cause rhodopsin misfolding lead to a spectrum of currently untreatable blinding diseases collectively termed retinitis pigmentosa. Small molecules to correct rhodopsin misfolding are therefore urgently needed. In this study, we utilized virtual screening to search for drug-like molecules that bind to the orthosteric site of rod opsin and improve its folding and trafficking.
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