mVOC: a database of microbial volatiles.

Nucleic Acids Res

University of Rostock, Institute of Biological Sciences, Rostock 18059, Germany, Charité-University Medicine Berlin, Structural Bioinformatics Group, Institute of Physiology & Experimental Clinical Research Center, Berlin 13125, Germany and Charité-University Medicine Berlin, Division of General Pediatrics, Department of Pediatric Oncology and Hematology, Berlin 13353, Germany.

Published: January 2014

AI Article Synopsis

  • Scents from flowers and animals play a key role in communication and ecological establishment, but less attention has been given to volatile organic compounds (VOCs) from microorganisms.
  • Microbial VOCs (mVOCs) are being explored as markers for detecting diseases and food spoilage, and they show potential against pathogens, although their ecological roles are not fully understood.
  • To centralize information on microbial volatiles, a new online database called mVOC has been created for research and reference.

Article Abstract

Scents are well known to be emitted from flowers and animals. In nature, these volatiles are responsible for inter- and intra-organismic communication, e.g. attraction and defence. Consequently, they influence and improve the establishment of organisms and populations in ecological niches by acting as single compounds or in mixtures. Despite the known wealth of volatile organic compounds (VOCs) from species of the plant and animal kingdom, in the past, less attention has been focused on volatiles of microorganisms. Although fast and affordable sequencing methods facilitate the detection of microbial diseases, however, the analysis of signature or fingerprint volatiles will be faster and easier. Microbial VOCs (mVOCs) are presently used as marker to detect human diseases, food spoilage or moulds in houses. Furthermore, mVOCs exhibited antagonistic potential against pathogens in vitro, but their biological roles in the ecosystems remain to be investigated. Information on volatile emission from bacteria and fungi is presently scattered in the literature, and no public and up-to-date collection on mVOCs is available. To address this need, we have developed mVOC, a database available online at http://bioinformatics.charite.de/mvoc.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964988PMC
http://dx.doi.org/10.1093/nar/gkt1250DOI Listing

Publication Analysis

Top Keywords

mvoc database
8
database microbial
4
volatiles
4
microbial volatiles
4
volatiles scents
4
scents well
4
well emitted
4
emitted flowers
4
flowers animals
4
animals nature
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!