Pairwise interactions in collagen and the design of heterotrimeric helices.

Curr Opin Chem Biol

Department of Chemistry, Rice University, 6100 Main Street, Houston, TX 77005, United States.

Published: December 2013

A comprehensive survey of single amino acid substitutions in the canonical Xaa-Yaa-Gly repeat has laid the ground work for our understanding of the collagen triple helix. Building upon this foundation requires understanding pairwise amino acid interactions which will allow us to prepare heterotrimeric helices with great specificity in addition to an overall improved control over helix structure and stability. Furthermore, detailed studies on these interactions will help us understand collagen's n structure, assembly mechanism and stability. The most important pairwise interaction so far identified in the collagen triple helix is the axial charge pair that can be formed between properly placed Lysine and either Aspartate or Glutamate residues. This review will summarize our understanding of this interaction and other charged pair interactions and how they have been successfully used to control collagen triple helix self-assembly.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cbpa.2013.10.019DOI Listing

Publication Analysis

Top Keywords

collagen triple
12
triple helix
12
heterotrimeric helices
8
amino acid
8
interactions will
8
pairwise interactions
4
collagen
4
interactions collagen
4
collagen design
4
design heterotrimeric
4

Similar Publications

A responsive cocktail nano-strategy breaking the immune excluded state enhances immunotherapy for triple negative breast cancer.

Nanoscale

January 2025

Department of Oncology, Shanghai East Hospital, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200092, China.

The exclusion of immune cells from the tumor can limit the effectiveness of immunotherapy in triple negative breast cancer (TNBC). The cyclic GMP-AMP synthase-stimulator of interferon genes (cGAS-STING) pathway plays a crucial role in priming adaptive anti-tumor immunity through the production of type I interferons (IFNs), facilitating the maturation of dendritic cells (DCs) and the function of T cells. Although the increased expression of programmed death-ligand 1 (PD-L1) upon STING activation is favorable for amplifying the efficacy of immune checkpoint inhibitors (ICIs) and realizing combination therapy, the penetration barrier remains a major obstacle.

View Article and Find Full Text PDF

AGEing of collagen: The effects of glycation on collagen's stability, mechanics and assembly.

Matrix Biol

February 2025

Department of Physics, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada. Electronic address:

Advanced Glycation End Products (AGEs) are the end result of the irreversible, non-enzymatic glycation of proteins by reducing sugars. These chemical modifications accumulate with age and have been associated with various age-related and diabetic complications. AGEs predominantly accumulate on proteins with slow turnover rates, of which collagen is a prime example.

View Article and Find Full Text PDF

Collagen as a bio-ink for 3D printing: a critical review.

J Mater Chem B

January 2025

Centre for 3D Models of Health and Disease, Division of Surgery and Interventional Science, Faculty of Medical Sciences, University College London, London, UK.

The significance of three-dimensional (3D) bioprinting in the domain of regenerative medicine and tissue engineering is readily apparent. To create a multi-functional bioinspired structure, 3D bioprinting requires high-performance bioinks. Bio-inks refer to substances that encapsulate viable cells and are employed in the printing procedure to construct 3D objects progressive through successive layers.

View Article and Find Full Text PDF
Article Synopsis
  • Non-triple helical collagen polypeptides (NTHs) are produced in tumor cells and tissues, lacking the typical collagen structure, and were found in various tumor cell lines and human lung cancer samples.
  • NTH production is influenced by serum concentration and hypoxic conditions, and they may play a role in tumor angiogenesis despite the presence of adequate ascorbic acid.
  • The study indicates that NTH production correlates with the accumulation of hypoxia-inducible factor-1α (HIF-1α), but HIF-1α doesn’t directly drive NTH α1(IV) production, suggesting NTHs could be potential therapeutic targets for cancer treatment.
View Article and Find Full Text PDF

Characterization and film-forming properties of collagen from three species of sea cucumber from the South China Sea: Emphasizing the effect of transglutaminase.

Int J Biol Macromol

January 2025

College of Food Science and Technology, Guangdong Ocean University, Zhanjiang 524088, China; Shenzhen Institute of Guangdong Ocean University, Shenzhen 518108, China; National Research and Development Branch Center for Shellfish Processing (Zhanjiang), Zhanjiang 524088, China; Guangdong Provincial Key Laboratory of Aquatic Products Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Zhanjiang 524088, China. Electronic address:

This study aimed to investigate the structural characteristics of Stichopus horrens collagen (SHC), Holothuria scabra collagen (HSC), and Holothuria leucospilota collagen (HLC) and to assess the effect of transglutaminase (TGase) on their film-forming properties. The results indicated that the collagens from three species of sea cucumbers were type I collagen with a complete triple helical structure. The thermal denaturation temperature of HLC (34.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!