Flux variability analysis enables comprehensive exploration of alternate optimal routes in a metabolic network. This method is especially useful with models such as bna572 for the developing oilseed rape embryo which is highly compartmentalized. Here, we describe a protocol for carrying out flux variability analysis on reactions and network projections of bna572 using well-established software (CellNetAnalyzer and COBRA) for constraint-based analysis of stoichiometric network reconstructions.
Download full-text PDF |
Source |
|---|---|
| http://dx.doi.org/10.1007/978-1-62703-688-7_18 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Spatiotemporal variability of air-sea CO fluxes in response to El Niño-related marine heatwaves in the tropical Pacific Ocean.
Mar Environ Res
January 2025
First Institute of Oceanography and Key Laboratory of Marine Sciences and Numerical Modelling, Ministry of Natural Resources, Qingdao, 266061, China; Laboratory for Regional Oceanography and Numerical Modelling, Qingdao Marine Science and Technology Center, Qingdao, 266237, China; Shandong Key Laboratory of Marine Sciences and Numerical Modeling, Qingdao, 266061, China. Electronic address:
The tropical Pacific is the largest oceanic source of carbon dioxide (CO) emissions, where persistent marine heatwaves (MHWs) frequently occur. During persistent MHW events which are associated with strong El Niño events, CO outgassing is notably reduced, however, its detailed spatiotemporal response to MHWs has not been fully characterized. In this study, we showed a high degree of consistency between CO source regions in the central and eastern tropical Pacific Ocean and the occurrence regions with average annual MHW days exceeding 45 days (co-occurring area covers 80% of the area where MHWs occur).
View Article and Find Full Text PDFResearch on the impact of the locations of luminaire failure on traffic safety in highway tunnels.
Traffic Inj Prev
January 2025
School of Civil and Transportation Engineering, Guangdong University of Technology, Guangzhou, China.
Objective: The safety of highway tunnels hinges heavily on proper lighting infrastructure, yet luminaire failures pose an ongoing challenge. The study aims at assessing the impact of the locations of luminaire failures on highway tunnels safety.
Methods: The research involved conducting 300 on-site scenarios with 29 participants, with simulated drives in visual recognition experiments.
Impact of variables on recovery time in patients undergoing hemodialysis: an international survey.
BMC Nephrol
January 2025
Nursing School of Porto, Porto, Portugal.
Background: Dialysis recovery time (DRT) refers to the period during which fatigue and weakness subside following hemodialysis treatment, allowing patients to resume their daily routines. This study aimed to identify the factors influencing DRT in hemodialysis patients in Turkey and Portugal, where the prevalence of chronic kidney disease is notably high.
Methods: A cross-sectional observational study was conducted in a private dialysis center in Turkey and three dialysis centers in Portugal.
Analytical expressions of specific yield for shallow groundwater estimation and modeling.
Environ Monit Assess
January 2025
Chinese-Israeli International Center for Research and Training in Agriculture, China Agricultural University, Beijing, People's Republic of China.
Specific yield (S) is an essential hydrogeological parameter in groundwater-related modeling and estimation. In this study, we proposed several new analytical expressions of S to characterize the nonlinear variations of S under shallow groundwater environments, encompassing S for three-layered soil, transition zone S, and flux-dependent S (in Boussinesq-type equation). The proposed S expression for three-layered soils expanded the applicability of previous expressions for homogeneous soil.
View Article and Find Full Text PDFPhotodegradation of steroid hormone micropollutants with palladium-porphyrin coated porous PTFE of varied morphological and optical properties.
Water Res
December 2024
Institute for Advanced Membrane Technology (IAMT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany. Electronic address:
In flow-through reactors, the photodegradation rate can be improved by enhancing contact and increasing the photocatalyst loading. Both can be attained with a higher surface-to-volume ratio. While previous studies focused on thin membranes (30 - 130 µm) with small pore sizes of 20 - 650 nm, this work employed poly(tetrafluoroethylene) (PTFE) supports, of which pore sizes are in the order of 10 µm, while the porosities and thicknesses are variable (22.
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!