Unusual ECD fragmentation attributed to gas-phase helix formation in a conformationally dynamic peptide.

Chem Commun (Camb)

School of Chemistry, University of Edinburgh, Joseph Black Building, King's Buildings, West Mains Road, Edinburgh, UKEH3 9JJ.

Published: January 2014

AI Article Synopsis

  • A decapeptide model, L4PL4K, was studied to understand its helix-forming properties without solvent using advanced techniques like ion mobility mass spectrometry and electron capture dissociation.
  • The research found that the resulting fragmentation patterns, mainly featuring b ions, suggest a relationship between helix formation and how the peptide behaves when it captures electrons.
  • These findings indicate that the unique fragmentation patterns observed could serve as markers for the peptide's conformational dynamics during the study.

Article Abstract

The helix-forming character of a model decapeptide, L4PL4K, is determined in the absence of solvent using ion mobility mass spectrometry, electron capture dissociation and molecular mechanics simulations. Unusual ECD fragmentation patterns dominated by b ions are attributed to helix formation upon electron capture and as a signature of conformational dynamics.

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Source
http://dx.doi.org/10.1039/c3cc46356gDOI Listing

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