Large cargo transport by nuclear pores: implications for the spatial organization of FG-nucleoporins.

EMBO J

Department of Molecular and Cellular Medicine, College of Medicine, The Texas A&M University, College Station, TX, USA.

Published: December 2013

Nuclear pore complexes (NPCs) mediate cargo traffic between the nucleus and the cytoplasm of eukaryotic cells. Nuclear transport receptors (NTRs) carry cargos through NPCs by transiently binding to phenylalanine-glycine (FG) repeats on intrinsically disordered polypeptides decorating the NPCs. Major impediments to understand the transport mechanism are the thousands of FG binding sites on each NPC, whose spatial distribution is unknown, and multiple binding sites per NTR, which leads to multivalent interactions. Using single molecule fluorescence microscopy, we show that multiple NTR molecules are required for efficient transport of a large cargo, while a single NTR promotes binding to the NPC but not transport. Particle trajectories and theoretical modelling reveal a crucial role for multivalent NTR interactions with the FG network and indicate a non-uniform FG repeat distribution. A quantitative model is developed wherein the cytoplasmic side of the pore is characterized by a low effective concentration of free FG repeats and a weak FG-NTR affinity, and the centrally located dense permeability barrier is overcome by multivalent interactions, which provide the affinity necessary to permeate the barrier.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3981140PMC
http://dx.doi.org/10.1038/emboj.2013.239DOI Listing

Publication Analysis

Top Keywords

large cargo
8
binding sites
8
multivalent interactions
8
transport
5
cargo transport
4
transport nuclear
4
nuclear pores
4
pores implications
4
implications spatial
4
spatial organization
4

Similar Publications

Extracellular vesicles (EVs) are cell derived nanovesicles which are implicated in both physiological and pathological intercellular communication, including the initiation, progression, and metastasis of cancer. The exchange of biomolecules between stromal cells and cancer cells via EVs can provide a window to monitor cancer development in real time for better diagnostic and interventional strategies. In addition, the process of secretion and internalization of EVs by stromal and cancer cells in the tumor microenvironment (TME) can be exploited for delivering therapeutics.

View Article and Find Full Text PDF

Extracellular vesicles (EVs) are gaining recognition as promising therapeutic carriers for immune modulation. We investigated the potential of EVs derived from HEK293FT cells to stabilize and deliver interleukin-10 (IL-10), a key anti-inflammatory cytokine. Using minicircle (MC) DNA vectors, we achieved IL-10 overexpression and efficient incorporation into EVs, yielding superior stability compared to free, recombinant IL-10 protein.

View Article and Find Full Text PDF

Peptide-Based Complex Coacervates Stabilized by Cation-π Interactions for Cell Engineering.

J Am Chem Soc

January 2025

Center for Sustainable Materials (SusMat), School of Materials Science and Engineering, Nanyang Technological University, Singapore 639798, Singapore.

Complex coacervation is a form of liquid-liquid phase separation, whereby two types of macromolecules, usually bearing opposite net charges, self-assemble into dense microdroplets driven by weak molecular interactions. Peptide-based coacervates have recently emerged as promising carriers to deliver large macromolecules (nucleic acids, proteins and complex thereof) inside cells. Thus, it is essential to understand their assembly/disassembly mechanisms at the molecular level in order to tune the thermodynamics of coacervates formation and the kinetics of cargo release upon entering the cell.

View Article and Find Full Text PDF

Tracking Boats on Amazon Rivers-A Case Study with the LoRa/LoRaWAN.

Sensors (Basel)

January 2025

Electronic and Information Technology Research and Development Center (CETELI), Federal University of Amazonas, Manaus 69067-005, AM, Brazil.

The Amazon region has the largest hydrographic basin in the world. The rivers act as roads, and boats serve as vehicles for transporting passengers and cargo to large urban centers, municipalities, riverside communities, villages, and settlements. The Amazon River transportation system faces critical gaps due to the lack of land infrastructure in certain areas, which makes rivers essential for commerce and access to isolated communities.

View Article and Find Full Text PDF

Growing evidence supports the importance of extracellular vesicle (EV) as mediators of communication in pathological processes, including those underlying respiratory disease. However, establishing methods for isolating and characterizing EVs remains challenging, particularly for respiratory samples. This study set out to address this challenge by comparing different EV isolation methods and evaluating their impacts on EV yield, markers of purity, and proteomic signatures, utilizing equine/horse bronchoalveolar lavage samples.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!