Parvularcula oceani [corrected] sp. nov., isolated from deep-sea water of the Southeastern Pacific Ocean.

Antonie Van Leeuwenhoek

State Key Laboratory for Marine Environmental Science, Institute of Marine Microbes and Ecospheres, Xiamen University, Xiamen, 361005, People's Republic of China.

Published: January 2014

A Gram-negative, aerobic, motile by single polar flagellum, short rod-shaped bacterium was isolated from a deep-seawater sample of the Southeastern Pacific Ocean. Growth was found to occur at 10-40 °C, at pH 4.0-10.0 and in the presence of 0-9.0 % (w/v) NaCl. The phylogenetic tree based on 16S rRNA gene sequences showed that strain JLT2013(T) fell within a clade comprising species of the genus Parvularcula and formed a coherent cluster with Parvularcula lutaonensis CC-MMS-1(T) (neighbour-joining phylogenetic tree) or Parvularcula dongshanensis SH25(T) (maximum-likelihood and maximum-parsimony phylogenetic trees). Sequence similarity analyses based on 16S rRNA gene sequences revealed that strain JLT2013(T) shows high sequence similarity to P. lutaonensis CC-MMS-1(T) (96.7 %), P. dongshanensis SH25(T) (96.0 %) and Parvularcula bermudensis HTCC2503(T) (95.2 %). The major cellular fatty acids were identified as C12:0 (34.3 %), summed feature 8 (C18:1 ω7c and/or C18:1 ω6c) (10.9 %), C16:0 (10.0 %) and C17:1 ω6c (7.2 %). The polar lipids were found to include diphosphatidylglycerol, phosphatidylglycerol, three sphingoglycolipids and three unknown glycolipids. Strain JLT2013(T) was found to contain Q-10 as the predominant quinone. The DNA G+C content was determined to be 66.3 mol%. In the light of the phenotypic characteristics, chemotaxonomic features and phylogenetic evidence gathered in this study, strain JLT2013(T) (=LMG 27362(T) = CGMCC 1.12400(T)) should be classified as a novel species in the genus Parvularcula, for which the name Parvularcula oceani [corrected] sp. nov. is proposed.

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http://dx.doi.org/10.1007/s10482-013-0071-6DOI Listing

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Parvularcula oceani [corrected] sp. nov., isolated from deep-sea water of the Southeastern Pacific Ocean.

Antonie Van Leeuwenhoek

January 2014

State Key Laboratory for Marine Environmental Science, Institute of Marine Microbes and Ecospheres, Xiamen University, Xiamen, 361005, People's Republic of China.

A Gram-negative, aerobic, motile by single polar flagellum, short rod-shaped bacterium was isolated from a deep-seawater sample of the Southeastern Pacific Ocean. Growth was found to occur at 10-40 °C, at pH 4.0-10.

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