Shima River, a tributary of Dongjiang River, located in Dongguan City of Guangdong Province, has been seriously polluted in the last 30 years. Water samples were collected from the river and the aquifer and the soil samples were collected as well in the wet (June) and dry (February) season to investigate the temporal and spatial variations of water quality in terms of heavy metal concentrations and inhibition rate of the luminescent bacterium (Vibrio fischeri, LUMIStox 300). Heavy metal concentrations and inhibition rate in river water were found decreasing from the upstream to the downstream, with metal concentrations exceeding the national surface water quality standard (Class I) for all samples and a highest inhibition of 38.34% (equivalent to moderate toxic) at R1 in the dry season. Significant difference (P < 0.01 or P < 0.001) in the wet and dry season was identified in both metal concentrations and inhibition rate, except at R11, which showed a inhibition rate of 15.56%, higher than those in all other samples in the wet season. Inhibition rate at GW4, GW5 and GW6 showed significant difference (P < 0.01 or P < 0.001) in the two periods, and the highest inhibition rate (15.88%) at GW6 in the dry season was considered as low in toxicity. The positive correlations (P < 0.05 or P < 0.01) between heavy metals (Zn, Fe, Mn and Ni) and inhibition rate were identified with correlation coefficients of 0.452, 0.567, 0.726 and 0.475, respectively. Heavy metal pollution of soil (Cu, Ni and Zn) near the river was due to the interaction between the river and the groundwater. Cd was heavily accumulated in the soil, while elevated concentrations of Fe and Mn were found in the river and the groundwater was heavily polluted by Ni.

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