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Multi-locus genome wide association study uncovers genetics of fresh seed dormancy in groundnut.
BMC Plant Biol
December 2024
Center of Excellence in Genomics & Systems Biology (CEGSB) and Centre for Pre-breeding Research (CPBR), International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, 502324, India.
Pre-harvest sprouting (PHS) in groundnut leads to substantial yield losses and reduced seed quality, resulting in reduced market value of groundnuts. Breeding cultivars with 14-21 days of fresh seed dormancy (FSD) holds promise for precisely mitigating the yield and quality deterioration. In view of this, six multi-locus genome-wide association study (ML-GWAS) models alongside a single-locus GWAS (SL-GWAS) model were employed on a groundnut mini-core collection using multi season phenotyping and 58 K "Axiom_Arachis" array genotyping data.
View Article and Find Full Text PDFCareHPV, Papanicolaou Positivity Status, and Their Association With Behavioral Risk Factors in Rural Women of Kamrup District, Assam, India.
Cancer Rep (Hoboken)
December 2024
Population Based Cancer Registry, Dr B. Borooah Cancer Institute, Guwahati, Assam, India.
Background And Objectives: Screening of rural women of Assam by careHPV test for high-risk HPV (hr-HPV) DNA and Papanicolaou (PAP) test for abnormal cytology.
Method: This prospective cross-sectional study included 480 non-pregnant women participants aged 20-70 years from Kamrup District, Assam. Two cervical scrap samples were obtained from eligible enrolled women.
Automation and miniaturization of high-throughput qPCR for gene expression profiling.
SLAS Technol
December 2024
Integrated Genomic Services, Research Department, Sidra Medicine, Doha, Qatar. Electronic address:
Quantitative PCR (qPCR) is a technique commonly employed in laboratories and core facilities. In our previous study, we had shown the possibility to automate steps in a panel-specific gene expression workflow by pairing Mosquito HV with BioMark HD. Here we aimed to automate the full workflow and explore miniaturization capabilities.
View Article and Find Full Text PDFA wrapper method for finding optimal subset of multimodal Magnetic Resonance Imaging sequences for ischemic stroke lesion segmentation.
Comput Biol Med
December 2024
Department of Electrical Engineering, Indian Institute of Technology Kharagpur, India.
Multimodal data, while being information-rich, contains complementary as well as redundant information. Depending on the target problem some modalities are more informative and thus relevant for decision-making. Identifying the optimal subset of modalities best suited to solve a particular task significantly reduces the complexity of acquisition without compromising performance.
View Article and Find Full Text PDFTwo sides of the same coin: Weathering differences of plastic fragments in coastal environments around the globe.
J Hazard Mater
December 2024
State Key Laboratory of Estuarine and Coastal Research, East China Normal University, Shanghai 200241, China. Electronic address:
Plastic debris in coastal environments usually undergoes weathering due to various environmental conditions. However, the weathering effects on exposed and shaded sides of the same plastics are underexplored. In this study, 1573 plastic fragments were collected from 15 coastal sites worldwide between December 2021 and December 2022, and weathering experiments were conducted outdoors.
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