The identification of the effects of toxicants on biological communities is hampered by the complexity and variability of communities. To overcome these challenges, the trait-based SPEAR approach has been developed. This approach is based on (i) identifying the vulnerable taxa using traits and (ii) aggregating these taxa into a group to reduce the between-replicate differences and scattered low-abundance distribution, both of which are typical for biological communities. This approach allows for reduction of the noise and determination of the effects of toxicants at low concentrations in both field and mesocosm studies. However, there is a need to quantitatively investigate its potential for mesocosm data evaluations and application in the ecological risk assessment of toxicants. In the present study, we analysed how the aggregation of the sensitive taxa can facilitate the identification of the effects. We used empirical data from a long-term mesocosm experiment with stream invertebrates and an insecticide as well as a series of simulated datasets characterised by different degrees of data matrix saturation (corresponding to different sampling efforts), numbers of replicates, and between-replicate differences. The analyses of both the empirical and simulated data sets revealed that the taxa aggregation approach allows for the detection of effects at a lower saturation of the data matrices, smaller number of replicates, and higher between-replicate differences when compared to the multivariate statistical method redundancy analysis. These improvements lead to a higher sensitivity of the analysed systems, as long-term effects were detected at lower concentrations (up to 1,000 times). These outcomes suggest that methods based on taxa aggregation have a strong potential for use in mesocosm data evaluations because mesocosm studies are usually poorly replicated, have high between-replicate variability, and cannot be exhaustively sampled due to technical and financial constraints.
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Forensic Sci Int
December 2024
Washington State Patrol Crime Laboratory, 2203 Airport Way South, Suite 250, Seattle, WA 98134, United States.
The analysis of forensic footwear evidence often requires the preparation of test impressions created under controlled laboratory conditions. When these test impressions are compared to questioned impressions, (dis)agreement in physical size is an important attribute that must be evaluated and documented. Integral to this comparison is an understanding of the variation that may exist between replicate test impressions, and test impressions created using different methods.
View Article and Find Full Text PDFSleep
October 2024
National Centre for Sport and Exercise Medicine, School of Sport, Exercise and Health Sciences, Loughborough University, Loughborough, United Kingdom.
Study Objectives: Using the necessary replicate-crossover design, we investigated whether there is inter-individual variability in home-assessed sleep in response to acute exercise.
Methods: Eighteen healthy men (mean(SD): 26(6) years) completed two identical control (8-h laboratory rest, 08:45-16:45) and two identical exercise (7-h laboratory rest; 1-h laboratory treadmill run [62(7)% peak oxygen uptake], 15:15-16:15) trials in randomised sequences. Wrist-worn actigraphy (MotionWatch 8) measured home-based sleep (total sleep time, actual wake time, sleep latency, sleep efficiency) two nights before (nights 1-2) and three nights after (nights 3-5) the exercise/control day.
Sci Total Environ
December 2024
Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, United States of America.
Meat Sci
August 2024
Fujihira Industry Co., Ltd. (FHK), Tokyo 113-0033, Japan.
The objective of the study was to independently validate a calibrated commercial handheld near infrared (NIR) spectroscopic device and test its repeatability over time using phenotypically diverse populations of Australian lamb. Validation testing in eight separate data sub-groups (n = 1591 carcasses overall) demonstrated that the NIR device had moderate precision (R = 0.4-0.
View Article and Find Full Text PDFBlood
May 2024
National Heart and Lung Institute, Imperial College London, London, United Kingdom.
For monogenic diseases caused by pathogenic loss-of-function DNA variants, attention focuses on dysregulated gene-specific pathways, usually considering molecular subtypes together within causal genes. To better understand phenotypic variability in hereditary hemorrhagic telangiectasia (HHT), we subcategorized pathogenic DNA variants in ENG/endoglin, ACVRL1/ALK1, and SMAD4 if they generated premature termination codons (PTCs) subject to nonsense-mediated decay. In 3 patient cohorts, a PTC-based classification system explained some previously puzzling hemorrhage variability.
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