RjpA in Rhodococcus jostii is the ortholog of a channel-forming porin, MspA. Deletion of rjpA delayed growth of R. jostii on cholate but not on cholesterol. Eventual growth on cholate involved increased expression of other porins, namely, RjpB, RjpC, and RjpD. Porins appear essential for the uptake of bile acids by mycolic acid bacteria.
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http://dx.doi.org/10.1128/AEM.01242-13 | DOI Listing |
Nat Commun
January 2025
Washington University in St. Louis, Saint Louis, MO, USA.
In-space biomanufacturing provides a sustainable solution to facilitate long-term, self-sufficient human habitation in extraterrestrial environments. However, its dependence on Earth-supplied feedstocks renders in-space biomanufacturing economically nonviable. Here, we develop a process termed alternative feedstock-driven in-situ biomanufacturing (AF-ISM) to alleviate dependence on Earth-based resupply of feedstocks.
View Article and Find Full Text PDFAppl Biochem Biotechnol
January 2025
Department of Plant Sciences, Faculty of Biological Sciences, Quaid-I-Azam University Islamabad, Islamabad, 45320, Pakistan.
The current research was conducted to synthesize Parietaria alsinifolia-mediated iron oxide nanoparticles (P.A@FeONPs) using the green and eco-friendly protocol. The biosynthesized P.
View Article and Find Full Text PDFSci Total Environ
January 2025
School of Biotechnology and Key Laboratory of Industrial Biotechnology Ministry of Education, Jiangnan University, 1800 Lihu Avenue, Wuxi 214122, China. Electronic address:
Poly(ethylene terephthalate) (PET) is a widely used plastic, but its improper disposal has caused serious environmental pollution. The development of bioconversion for PET waste into high-value chemicals has gained significant attention as an innovative solution. In this study, a novel guided screening strategy involving mixed-bacteria fermentation and partitioned purification (MBF) was proposed to first successful isolate Rhodococcus jostii LETBE 8896, a strain capable of naturally producing 4 μg/L of lycopene from PET hydrolysate.
View Article and Find Full Text PDFN Biotechnol
November 2024
Department of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA. Electronic address:
Kinetic modeling of biochemical reactions and bioreactor systems can enhance and quantify knowledge gained from cell culture experiments and has many applications in bioprocess design and optimization. The Microbial and Algal Growth Modeling Application (MAGMA) is a user-friendly MATLAB-based software for streamlining the development of kinetic models for various bioreactor systems. This study details the MAGMA workflow by demonstrating the creation of kinetic models with systems of ordinary differential equations (ODEs), model fitting by solving inverse problems, statistical evaluation of model fitting quality, and visual display of simulation results.
View Article and Find Full Text PDFTrends Biotechnol
November 2024
Department of Energy, Environmental, and Chemical Engineering, Washington University in St Louis, St Louis, MO 63130, USA; Division of Biology and Biomedical Sciences, Washington University in St Louis, St Louis, MO 63130, USA; Synthetic Biology Group, J. Craig Venter Institute, La Jolla, CA 92037, USA. Electronic address:
Poly(ethylene terephthalate) (PET) waste is of low degradability in nature, and its mismanagement threatens numerous ecosystems. To combat the accumulation of waste PET in the biosphere, PET bio-upcycling, which integrates chemical pretreatment to produce PET-derived monomers with their microbial conversion into value-added products, has shown promise. The recently discovered Rhodococcus jostii RPET strain can metabolically degrade terephthalic acid (TPA) and ethylene glycol (EG) as sole carbon sources, and it has been developed into a microbial chassis for PET upcycling.
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