A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Metagenomic mining of feruloyl esterases from termite enteric flora. | LitMetric

Metagenomic mining of feruloyl esterases from termite enteric flora.

Appl Microbiol Biotechnol

CSIR Biosciences, Building 18 Meiring Naudé Road, Brummeria, PO Box 395, Pretoria, 0001, South Africa,

Published: January 2014

AI Article Synopsis

  • A metagenome expression library was developed from the gut symbionts of Trinervitermes trinervoides termites and screened, identifying seven recombinant fosmids with feruloyl esterase (FAE) activities.
  • The sequences of the seven FAE genes were between 260 and 274 amino acids long, showing 45-59% identity with other enzymes in the GenBank database, and included a signature motif associated with serine hydrolases.
  • Six out of the seven FAE genes were successfully expressed in E. coli, with the enzymes displaying optimal activity at temperatures of 40-70 °C and pH levels of 6.5 to 8.0, while demonstrating a substrate preference that

Article Abstract

A metagenome expression library was created from Trinervitermes trinervoides termite hindgut symbionts and subsequently screened for feruloyl esterase (FAE) activities, resulting in seven recombinant fosmids conferring feruloyl esterase phenotypes. The amino acid sequence lengths of the seven FAE encoding open reading frames (ORFs) ranged from 260 to 274 aa and encoded polypeptides of between 28.9 and 31.4 kDa. The highest sequence identity scores for the seven ORFs against the GenBank database were between 45 and 59 % to a number of carboxyl ester hydrolyses. The seven FAE primary structures contained sequence motifs that correspond well with a classical pentapeptide (G-x-S-x-G) serine hydrolyse signature motif which harbours the catalytic serine residue in other FAE families. Six of the seven fae genes were successfully expressed heterologously in Escherichia coli, and the purified enzymes exhibited temperature optima range of 40-70 °C and the pH optima of between 6.5 and 8.0. The k(cat)/K(M) ratios for the six characterised FAEs showed the following order of substrate preference: methyl sinapate > methyl ferulate > ethyl ferulate. All six FAEs showed poor conversion rates against methyl p-coumarate and methyl caffeate, both of which lacked the methoxy (O-CH₃) group substituent on the aromatic ring of the ester substrates, emphasising the requirement for at least one methoxy group on the aromatic ring of the hydroxycinnamic acid ester substrate for optimal FAE activity.

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00253-013-4909-7DOI Listing

Publication Analysis

Top Keywords

feruloyl esterase
8
aromatic ring
8
fae
6
metagenomic mining
4
mining feruloyl
4
feruloyl esterases
4
esterases termite
4
termite enteric
4
enteric flora
4
flora metagenome
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!