Based on detailed, high level ab initio calculations on a number of halogenated compounds of second row, late p-block elements, the SF(n), ClF(n), PFn, SCl(n), and SF(n)Cl families, we found that a new type of bond--the recoupled pair bond--accounts for the ability of these elements to form hypervalent, or hypercoordinated, compounds. Hypervalent molecules are formed when it is energetically favorable for the electrons in a lone pair orbital to be recoupled, allowing each of the electrons to form chemical bonds with ligands. In this paper, we characterize the structures and energies of the ground and low-lying excited states of the ClF(n)(+) (n = 1-6) ions, using high level ab initio methods [MRCI, CCSD(T)/RCCSD(T)] with large correlation consistent basis sets. We computed a number of quantities, including ClF(n)(+) structures, bond dissociation energies, and ClF(n) ionization energies and compared our results with the available experimental data. Both the bond dissociation energies and the ionization energies oscillate, variations that are readily explained using the recoupled pair bonding model. Comparisons are drawn between the ClF(n)(+) cations and their counterparts in the isoelectronic SF(n) series, which possess many similarities. We found two significant differences between the ClF(n)(+) and the SF(n) series: (i) the bond dissociation energies of ClF(n)(+) are much weaker than those of the corresponding SF(n) species, and (ii) there is no stable (3)A2 state in ClF2(+) corresponding to the stable state found in SF2. An examination of the Mulliken populations at the HF/AVTZ level for ClF(n)(+) and SF(n) species predicts that the F atom in the axial (recoupled pair bonding) position is more highly charged than the F atom in the equatorial (covalent bonding) position; there is also less charge transfer to the F atoms in ClF(n)(+) than in SF(n). The positive charge on Cl(+) makes it more difficult for an F atom to attract electrons from Cl(+) than from S and correspondingly less favorable to recouple the electrons in the lone pair orbitals in the ClF(n)(+) species.
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J Magn Reson
March 2023
Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States; Pittsburgh Center for HIV Protein Interactions, University of Pittsburgh School of Medicine, 1051 Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, PA 15261, United States. Electronic address:
Chemical shift tensors (CSTs) are sensitive probes of structure and dynamics. R-symmetry pulse sequences (RNCSA) can efficiently recouple CSTs of varying magnitudes in magic angle spinning (MAS) NMR experiments, for a broad range of conditions and MAS frequencies. Herein, we introduce dual-channel R-symmetry pulse sequences for simultaneously recording CSTs of two different nuclei in a single experiment (DORNE-CSA).
View Article and Find Full Text PDFJ Chem Phys
August 2022
Department of Chemistry, University of Washington, Seattle, Washington 98195, USA.
We extended our studies of the effect of dynamical electron correlation on the covalent bonds in the AH and AF series (A = B-F) to the recoupled pair bonds in the excited aΣ states of the CH and CF molecules. Dynamical correlation is energetically less important in the aΣ states than in the corresponding XΠ states for both molecules, which is reflected in smaller changes in bond energies (D). Changes in the equilibrium bond distance (R) and vibrational frequency (ω), on the other hand, are influenced by the changes in the slope and curvature of the dynamical electron correlation energy as a function of the internuclear distance R, E(R).
View Article and Find Full Text PDFJ Phys Chem A
September 2021
Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States.
It has long been known that there is a fundamental difference in the electronic structures of CH and SiH, two isoelectronic molecules. The former is a saddle point for the S2 exchange reaction H + CH → [CH] → CH + H, while the latter is a stable molecule that is bound relative to SiH + H. SCGVB calculations indicate that this difference is the result of a dramatic difference in the nature of the axial electron pairs in these anions.
View Article and Find Full Text PDFMolecules
July 2021
RIKEN-JEOL Collaboration Center, RIKEN, Yokohama, Kanagawa 230-0045, Japan.
Three-dimensional electron diffraction crystallography (microED) can solve structures of sub-micrometer crystals, which are too small for single crystal X-ray crystallography. However, R factors for the microED-based structures are generally high because of dynamic scattering. That means R factor may not be reliable provided that kinetic analysis is used.
View Article and Find Full Text PDFJ Exp Biol
May 2021
Department of Biology, Temple University, Philadelphia, PA 19122, USA.
The voluntary amputation of an appendage, or autotomy, is an effective defensive mechanism that allows an animal to escape aggressive interactions. However, animals may suffer long-term costs that can reduce their overall fitness. Atlantic ghost crabs (Ocypode quadrata) are one of the fastest terrestrial invertebrates, and regularly lose one or more limbs in response to an antagonist encounter.
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