Cooperativity in thermal and force-induced protein unfolding: integration of crack propagation and network elasticity models.

Phys Rev Lett

The Stella and Avram Goren-Goldstein Department of Biotechnology Engineering, Ben-Gurion University of The Negev, Beer Sheva 84105, Israel.

Published: March 2013

AI Article Synopsis

  • The study combines a gaussian network model with a crack propagation model to analyze how proteins unfold under force and temperature.
  • Researchers propose that bond rupture in proteins is influenced by specific threshold values for mean strain and strain fluctuations.
  • The findings reveal that protein unfolding often occurs in cooperative bursts, resembling "avalanches" of bond breaking rather than a gradual process.

Article Abstract

We investigate force-induced and temperature-induced unfolding of proteins using the combination of a gaussian network model and a crack propagation model based on "bond"-breaking independent events. We assume the existence of threshold values for the mean strain and strain fluctuations that dictate bond rupture. Surprisingly, we find that this stepwise process usually leads to a few cooperative, first-order-like, transitions in which several bonds break simultaneously, reminiscent of the "avalanches" seen in disordered networks.

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Source
http://dx.doi.org/10.1103/PhysRevLett.110.138101DOI Listing

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