eRNAs are required for p53-dependent enhancer activity and gene transcription.

Mol Cell

Division of Gene Regulation, the Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, the Netherlands; Doctoral Programme in Biomedicine and Experimental Biology, Centre for Neuroscience and Cell Biology, 3004-517 Coimbra, Portugal.

Published: February 2013

AI Article Synopsis

  • p53 can bind to genes involved in cell growth and survival, influencing their activity and the cell cycle.
  • Many p53 binding sites are found far from known target genes, and these sites show characteristics of enhancer regions that can boost gene expression.
  • These enhancer regions (p53BERs) produce specific RNAs (eRNAs) that help enhance transcription of nearby genes and are crucial for activating p53-related cell cycle control mechanisms.

Article Abstract

Binding within or nearby target genes involved in cell proliferation and survival enables the p53 tumor suppressor gene to regulate their transcription and cell-cycle progression. Using genome-wide chromatin-binding profiles, we describe binding of p53 also to regions located distantly from any known p53 target gene. Interestingly, many of these regions possess conserved p53-binding sites and all known hallmarks of enhancer regions. We demonstrate that these p53-bound enhancer regions (p53BERs) indeed contain enhancer activity and interact intrachromosomally with multiple neighboring genes to convey long-distance p53-dependent transcription regulation. Furthermore, p53BERs produce, in a p53-dependent manner, enhancer RNAs (eRNAs) that are required for efficient transcriptional enhancement of interacting target genes and induction of a p53-dependent cell-cycle arrest. Thus, our results ascribe transcription enhancement activity to p53 with the capacity to regulate multiple genes from a single genomic binding site. Moreover, eRNA production from p53BERs is required for efficient p53 transcription enhancement.

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Source
http://dx.doi.org/10.1016/j.molcel.2012.11.021DOI Listing

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