Statistical model for self-assembly of trimesic acid molecules into homologous series of flower phases.

Phys Rev E Stat Nonlin Soft Matter Phys

Semiconductor Physics Institute, Center for Physical Sciences and Technology, A. Goštauto 11, LT-01108 Vilnius, Lithuania.

Published: November 2012

The statistical three-state model is proposed to describe the ordering of triangular TMA molecules into flower phases. The model is solved on a rescaled triangular lattice, assuming following intermolecular interactions: exclusion of any molecules on nearest neighbor sites, triangular trio H-bonding interactions for molecules of the same orientation on next-nearest neighbor sites, and dimeric H-bonding interactions for molecules of different ("tip-to-tip") orientations on third-nearest neighbor sites. The model allows us to obtain the analytical solution for the ground state phase diagram with all homologous series of flower phases included, starting with the honeycomb phase (n=1) and ending with the superflower structure (n=∞). Monte Carlo simulations are used to obtain the thermodynamical properties of this model. It is found that phase transitions from disordered to any of the flower phases (except n=1) undergo via intermediate correlated triangular domains structure. The transition from the disordered phase to the intermediate phase is, most likely, of the first order, while the transition from the intermediate to the flower phase is definitely first order phase transition. The phase diagrams including low-temperature flower phases are obtained. The origin of the intermediate phase, phase separation, and metastable structures are discussed.

Download full-text PDF

Source
http://dx.doi.org/10.1103/PhysRevE.86.051118DOI Listing

Publication Analysis

Top Keywords

flower phases
20
neighbor sites
12
phase
10
homologous series
8
series flower
8
h-bonding interactions
8
interactions molecules
8
intermediate phase
8
flower
6
molecules
5

Similar Publications

Molecular mechanism of interaction between SHORT VEGETATIVE PHASE and APETALA1 in Arabidopsis thaliana.

Plant Physiol Biochem

January 2025

Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), Shaanxi Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, Xi'an, 710069, Shaanxi, People's Republic of China. Electronic address:

Point mutations were introduced into specific leucine (L) amino acids within the K domain of SHORT VEGETATIVE PHASE (SVP), and their effects on the SVP-AP1 interaction were assessed. Yeast two-hybrid experiments and β-galactosidase activity assays demonstrated that SVP maintained its capacity to interact with APETALA1 (AP1) despite point mutations at the 108th, 116th, 119th, and 127th leucine residues, where leucine was substituted with alanine (A). However, the mutation of the leucine residue at position 124 to alanine abolished the interaction between SVP and AP1 regardless of whether the mutation was singular or combined with others.

View Article and Find Full Text PDF

Revisiting the female germline cell development.

Front Plant Sci

January 2025

College of Life Sciences, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.

The formation of the female germline is the fundamental process in most flowering plants' sexual reproduction. In , only one somatic cell obtains the female germline fate, and this process is regulated by different pathways. Megaspore mother cell (MMC) is the first female germline, and understanding MMC development is essential for comprehending the complex mechanisms of plant reproduction processes.

View Article and Find Full Text PDF

Female-biased nectar production is associated with the Darwin's inflorescence syndrome.

Plant Biol (Stuttg)

January 2025

Grupo de Investigación en Ecología de la Polinización, Laboratorio Ecotono, INIBIOMA (CONICET-Universidad Nacional del Comahue), San Carlos de Bariloche, Río Negro, Argentina.

Plant reproduction is influenced not only by individual flower characteristics but also by the arrangement of flowers within inflorescences. In bee-pollinated plants with protandrous flowers in vertical acropetal inflorescences - where male fertile flower structures mature before female ones and basal flowers open first (i.e.

View Article and Find Full Text PDF

Tartary buckwheat (Fagopyrum tataricum), a functional grain known for its medicinal and nutritional properties, has garnered significant attention due to its high flavonoid content and unique health benefits. Heat stress during the flowering stage can lead to sterility in Tartary buckwheat, resulting in reduced yields. This study investigates the effects of a treatment (30/27 °C for 7 days) on flower development, fertility, stress physiology, and gene expression in Tartary buckwheat, while also validating the efficacy of hormone treatments in alleviating the negative effects of heat stress.

View Article and Find Full Text PDF

In some mutualisms involving host plants, photoassimilates are provided as rewards to symbionts. Endophagous organisms often manipulate host plants to increase access to photoassimilates. Host manipulations by endophagous organisms that are also mutualists are poorly understood.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!