Transmission Raman spectroscopy has been effectively utilized for the discrimination of rice samples according to geographical origin. Since the constituents of rice are heterogeneously distributed and/or localized in a grain, the collection of Raman spectra providing a better compositional representation of packed rice grains is an essential requirement for accurate analysis. The optimal packing thickness yielding the most reproducible transmission spectra was initially determined. Internal propagation of radiation was more sensitively influenced by random packing when a packing was thinner; while, a thicker packing largely attenuated transmitting Raman signal and eventually degraded the signal-to-noise ratio of collected spectra. At the determined packing thickness, transmission spectra of all rice samples were collected, and discrimination into two different geographical origins was performed using principal component analysis (PCA) combined with linear discriminant analysis (LDA). For comparison, back-scattering Raman spectra of the same samples were also collected. The discrimination accuracy was improved when Raman spectra collected directly through the packed rice grains were used. Since the constituents of rice were not homogeneously distributed in a grain as confirmed using Raman microscopy, the transmission measurement enabling transversal sampling across a packing of rice grains was better for compositional representation of individual grains in the packing and able to recognize minute spectral differences between two groups, ultimately leading to more accurate discrimination of geographical origin.
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http://dx.doi.org/10.1016/j.talanta.2012.10.001 | DOI Listing |
Front Plant Sci
January 2025
College of Life and Health Sciences, Anhui Science and Technology University, Fengyang, China.
Introduction: This study aims to investigate the impact of geographical origin on the metabolite composition and bioactivity of Thesium chinense Turcz. (TCT), a member of the Apiaceae family renowned for its wide range of pharmacological properties, including antioxidant, antimicrobial, and anti-inflammatory effects. In this study, we investigated the whole plants of TCT from different regions in China, aiming to explore the geographical variation of TCT.
View Article and Find Full Text PDFPlants (Basel)
January 2025
Maize Research Institute Zemun Polje, Slobodana Bajića 1, 11185 Belgrade, Serbia.
Driven by the growing demands for plant-based protein in Europe and attempts of soybean breeding programs to improve the productivity of created varieties, this study aimed to enhance genetic resource utilization efficiency by providing information relevant to well-focused breeding targets. A set of 90 accessions was subjected to a comprehensive assessment of genetic diversity in a soybean working collection using three marker types: morphological descriptors, agronomic traits, and SSRs. Genotype grouping patterns varied among the markers, displaying the best congruence with pedigree data and maturity for SSRs and agronomic traits, respectively.
View Article and Find Full Text PDFPlants (Basel)
January 2025
Faculty of Forestry, University of Sarajevo, Zmaja od Bosne 8, 71 000 Sarajevo, Bosnia and Herzegovina.
Polyploidy is a powerful mechanism driving genetic, physiological, and phenotypic changes among cytotypes of the same species across both large and small geographic scales. These changes can significantly shape population structure and increase the evolutionary and adaptation potential of cytotypes. , an edaphic steno-endemic species with a narrow distribution in the Balkan Peninsula, serves as an intriguing case study.
View Article and Find Full Text PDFInsects
January 2025
Department of Animal Morphology, Physiology and Genetics, Faculty of AgriSciences, Mendel University in Brno, Zemědělská 1, 613 00 Brno, Czech Republic.
To date, no study has been conducted to investigate the diversity in honeybee populations of in the Czech Republic. Between 2022 and 2023, worker bees were collected from colonies distributed throughout the Czech Republic in 77 districts, and their genetic differences were examined using 22 microsatellite loci. The samples were obtained from hives ( = 3647) and through the process of capture on flowers ( = 553).
View Article and Find Full Text PDFMicroorganisms
January 2025
College of Food Science and Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China.
As the mobile cassette carrier of the methicillin resistance gene that is transported across staphylococci species, the evolution and origin of Staphylococcal Cassette Chromosome (SCC)-and in particular, the composition of and SCC-have been extensively discussed in the scientific literature; however, information regarding its dissemination across geographical limits and evolution over decades remains limited. In addition, whole-genome sequencing-based macro-analysis was unable to provide sufficiently detailed evolutionary information on SCC. Herein, the cassette chromosome recombinase genes , as essential components of SCC, were employed to explore the evolution of SCC.
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