An automatic modified polymerase chain reaction procedure for hepatitis B virus DNA detection.

J Virol Methods

Département de Biologie Moléculaire, Institut Henry Beaufour, Les Ulis, France.

Published: January 1990

AI Article Synopsis

  • Sixteen specific primer couples were chosen for PCR testing of hepatitis B virus (HBV), allowing effective amplification of the entire HBV genome.
  • Three particular primer couples performed well in terms of specificity and efficiency during the testing process.
  • A simplified PCR method using two thermal steps successfully detected single HBV DNA molecules and enabled rapid automation for 40 amplification cycles in just over an hour.

Article Abstract

In order to perform an efficient and reproducible diagnostic test for hepatitis B virus (HBV) infection using the polymerase chain reaction (PCR), sixteen primer couples specific for the HBV genome were selected. Primers 15-31 nucleotides in length containing between 31-73% GC permitted amplification of fragments corresponding to the whole HBV genome. The specificity and efficiency of PCR amplification were studied in detail using DNA extracted from either a viral particle preparation or from the liver of a patient with chronic active hepatitis. Three primer couples in the X, C and PreS regions, i.e. MD24/MD26, MD27/MD31 and MD19/MD18, respectively, gave satisfactory results and performed efficiently under highly stringent hybridization conditions. A modified PCR procedure was then developed using only two thermal steps with a temperature shift of 16 degrees C. This simple method was as efficient as conventional PCR and permitted detection of a single HBV DNA molecule with the X region specific primer couple. The automatization of this PCR-based procedure permitted 40 amplification cycles in 105 min.

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http://dx.doi.org/10.1016/0166-0934(90)90145-6DOI Listing

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