We present a theoretical investigation of the influence of domain boundaries on the Ge/Si(111)-5 × 5 phase using both large-scale DFT simulations and an analytical model. It is shown that different boundary types modify the atomic and electronic structure of the adjoining 5 × 5 domains in very different ways. A simple theoretical model, that describes the energy interaction J between the boundaries and the 5 × 5 phase, is presented and the interaction energy decay J(x) ≈ x(-n) for different domain boundaries is estimated. Additionally, the influence of the boundaries on the atomic and electronic structure of adatoms in the parental 5 × 5 phase is analyzed and it is argued that the presence of domain boundaries may strongly affect not only the physical but also the chemical properties of the Ge/Si(111)-5 × 5 phase.
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http://dx.doi.org/10.1088/0953-8984/24/44/445003 | DOI Listing |
Bioinformatics
January 2025
Department of Biology, Emory University, Atlanta, GA 30322, United States.
Motivation: In silico functional annotation of proteins is crucial to narrowing the sequencing-accelerated gap in our understanding of protein activities. Numerous function annotation methods exist, and their ranks have been growing, particularly so with the recent deep learning-based developments. However, it is unclear if these tools are truly predictive.
View Article and Find Full Text PDFBiomimetics (Basel)
January 2025
School of Mathematics and Information Science, North Minzu University, Yinchuan 750021, China.
The Whale Optimization Algorithm (WOA) is recognized for its simplicity, few control parameters, and effective local optima avoidance. However, it struggles with global search efficiency and slow convergence. This paper introduces the Improved WOA (ImWOA) to overcome these challenges.
View Article and Find Full Text PDFBiomimetics (Basel)
January 2025
Institute of Philosophy, University of Rostock, 18051 Rostock, Germany.
Biomimetics aims to learn from living systems to develop innovative technical artefacts. As it transcends disciplinary boundaries and needs to integrate both biological and technological knowledge, a domain ontology for biomimetics would be highly desirable. So far, several terminological resources have been designed to support the biomimetic development process.
View Article and Find Full Text PDFEur J Nucl Med Mol Imaging
January 2025
A*STAR Skin Research Labs (A*SRL), Agency for Science, Technology and Research (A*STAR), 31 Biopolis Way, #07-01, Nanos, Singapore, 138669, Republic of Singapore.
Purpose: Basal Cell Carcinoma (BCC), the most common subtype of non-melanoma skin cancers (NMSC), is prevalent worldwide and poses significant challenges due to their increasing incidence and complex treatment considerations. Existing clinical approaches, such as Mohs micrographic surgery, are time-consuming and labour-intensive, requiring meticulous layer-by-layer excision and examination, which can significantly extend the duration of the procedure. Current optical imaging solutions also lack the necessary spatial resolution, penetration depth, and contrast for effective clinical use.
View Article and Find Full Text PDFSci Rep
January 2025
Affiliated Hospital 6 of Nantong University, Yancheng Third People's Hospital, Yancheng, 224001, Jiangsu, China.
Convolutional Neural Networks (CNNs) have achieved remarkable segmentation accuracy in medical image segmentation tasks. However, the Vision Transformer (ViT) model, with its capability of extracting global information, offers a significant advantage in contextual information compared to the limited receptive field of convolutional kernels in CNNs. Despite this, ViT models struggle to fully detect and extract high-frequency signals, such as textures and boundaries, in medical images.
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