Molecular dynamics simulations of the pure structure II tetrahydrofuran clathrate hydrate and binary structure II tetrahydrofuran clathrate hydrate with CO(2), CH(4), H(2)S, and Xe small cage guests are performed to study the effect of the shape, size, and intermolecular forces of the small cages guests on the structure and dynamics of the hydrate. The simulations show that the number and nature of the guest in the small cage affects the probability of hydrogen bonding of the tetrahydrofuran guest with the large cage water molecules. The effect on hydrogen bonding of tetrahydrofuran occurs despite the fact that the guests in the small cage do not themselves form hydrogen bonds with water. These results indicate that nearest neighbour guest-guest interactions (mediated through the water lattice framework) can affect the clathrate structure and stability. The implications of these subtle small guest effects on clathrate hydrate stability are discussed.
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http://dx.doi.org/10.1063/1.4739928 | DOI Listing |
Chem Sci
December 2024
Department of Chemistry, School of Science, Westlake University 310030 Hangzhou Zhejiang Province China.
Sulfonium is an electrophilic and biocompatible group that is widely applied in synthetic chemistry on small molecules. However, there have been few developments of peptide or protein-based sulfonium tools. We recently reported sulfonium-mediated tryptophan crosslinking and developed NleSme2 (norleucine-dimethylsulfonium) peptides as dimethyllysine mimics that crosslink site-specific methyllysine readers.
View Article and Find Full Text PDFJ Am Chem Soc
December 2024
Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia Street, Reno, Nevada 89557, United States.
Hydration dynamics and solvent viscosity play critical roles in the structure and function of biomolecules. An overwhelming body of evidence suggests that protein and membrane fluctuations are closely linked to solvent fluctuations. While extensive research exists on the use of vibrational probes to detect local interactions and solvent dynamics, fewer studies have explored how the behavior of these reporters changes in response to bulk viscosity.
View Article and Find Full Text PDFSmall
December 2024
College of Materials and Chemistry, China Jiliang University, Hangzhou, 310018, China.
Biomass with naturally ion-conducting segments (e.g., hydroxyl) holds promise for sustainable batteries.
View Article and Find Full Text PDFResearch (Wash D C)
December 2024
State Key Laboratory of Pharmaceutical Biotechnology, Department of Gastroenterology, Nanjing Drum Tower Hospital, School of Life Sciences, Nanjing University, Nanjing, China.
The NLRP3 inflammasome plays a critical role in various inflammatory conditions. However, despite extensive research in targeted drug development for NLRP3, including MCC950, clinical success remains elusive. Here, we discovered that the activated NLRP3 inflammasome complex (disc-NLRP3) and the activating mutation L351P exhibited resistance to MCC950.
View Article and Find Full Text PDFPoult Sci
December 2024
Institute of Animal Husbandry and Veterinary Medicine, Anhui Academy of Agriculture Science, Hefei 230031, China. Electronic address:
The objective of this study was to evaluate the effects of cage size on the natural behavior, serum biochemistry, production performance and hypothalamic transcriptome profiles of laying hens. A total of 360 79-week-old hens were selected and randomly assigned to three groups (with five replicates each) with different cage sizes: large cages (LCs), medium cages (MCs), and small cages (SCs). The stocking density remained consistent across all groups throughout the experimental period.
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