Large collaborative centers are a common model for accomplishing integrated environmental health research. These centers often include various types of scientific domains (e.g., chemistry, biology, bioinformatics) that are integrated to solve some of the nation's key economic or public health concerns. The Superfund Research Center (SRP) at Oregon State University (OSU) is one such center established in 2008 to study the emerging health risks of polycyclic aromatic hydrocarbons while using new technologies both in the field and laboratory. With outside collaboration at remote institutions, success for the center as a whole depends on the ability to effectively integrate data across all research projects and support cores. Therefore, the OSU SRP center developed a system that integrates environmental monitoring data with analytical chemistry data and downstream bioinformatics and statistics to enable complete "source-to-outcome" data modeling and information management. This article describes the development of this integrated information management system that includes commercial software for operational laboratory management and sample management in addition to open-source custom-built software for bioinformatics and experimental data management.
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http://dx.doi.org/10.1177/2211068212448428 | DOI Listing |
Microbiol Resour Announc
January 2025
Department of Natural Sciences, Northwest Missouri State University, Maryville, Missouri, USA.
Soil bacteria were isolated from the Tar Creek Superfund site in the presence of cadmium. Eight of these strains belong to the genus , whereas one strain belongs to the genus . Here, we report drafts of their genome sequences and highlight cadmium-resistance genes required in an exceptionally contaminated environment.
View Article and Find Full Text PDFJ Chromatogr B Analyt Technol Biomed Life Sci
January 2025
Christina Lee Brown Envirome Institute, University of Louisville, Louisville, KY 40202, United States; Superfund Research Center, University of Louisville, Louisville, KY 40202, United States; Division of Environmental Medicine, Department of Medicine, University of Louisville, Louisville, KY 40202, United States. Electronic address:
Human exposure to volatile organic compounds (VOCs) poses significant health risks, contributing to cardiovascular disease, pulmonary disease, and cancer. Measurement of VOC metabolites (VOCm) in urine by liquid chromatography-mass spectrometry (LC-MS) is a preferred method for VOCm analysis; however, existing methods encounter challenges related to sensitivity, throughput, and analyte coverage. In addition to VOCm, the measurement of tobacco alkaloids (TAm) is critical to account for tobacco use in population-based studies.
View Article and Find Full Text PDFbioRxiv
December 2024
University of Louisville Superfund Research Center, University of Louisville, Louisville, KY 40202.
Benzene is a ubiquitous environmental and occupational pollutant abundant in household products, petrochemicals, and cigarette smoke. It is also a well-known carcinogen and hematopoietic toxin. Population-based studies indicate an increased risk of heart failure in subjects exposed to inhaled benzene, which coincides with the infiltration of immune cells into the myocardium.
View Article and Find Full Text PDFSci Total Environ
January 2025
U.S. Environmental Protection Agency, Office of Research and Development, Center for Environmental Solutions and Emergency Response, Andrew W. Breidenbach Research Center, 26 West Marin Luther King Drive, Cincinnati, OH 45268, USA. Electronic address:
The mobility and bioavailability of metal contaminants such as lead (Pb) and zinc (Zn) is impacted by their interactions with other sediment constituents such as iron (Fe), sulfur (S), and organic matter, which depend on sediment redox conditions. Understanding the role that water level fluctuations have on redox conditions and subsequent impacts on metal mobility is critical for predicting impacts of increased wetting and drying cycles resulting from climate-related changes or management actions. This study measured the sediment-porewater partitioning of Pb and Zn in the Coeur d'Alene River basin downstream of the Bunker Hill Superfund Site under both flooded and seasonally dry conditions.
View Article and Find Full Text PDFObjectives: The specific aims of the project are: (1) Examine the impact of COVID-19 on pregnancy experiences and outcomes; (2) Examine the mental health impact of COVID-19 in pregnant women and mothers of children 12 months or younger; (3) Identify risk and protective factors among this population in Puerto Rico.
Methods: Participants were recruited from the Puerto Rico Team for Exploring Contamination Threats (PROTECT) Superfund Program, which is composed of pregnant women and mothers from the northern karst region of Puerto Rico. The research had a mixed methods approach with a quantitative survey (n = 184) and qualitative interviews (n = 10); data collection was done in virtual mode.
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