Inbreeding depression is a key factor affecting the persistence of natural populations, particularly when they are fragmented. In species with mixed mating systems, inbreeding depression can be estimated at the population level by regressing the average progeny fitness by the selfing rate of their mothers. We applied this method using simulated populations to investigate how population genetic parameters can affect the detection power of inbreeding depression. We simulated individual selfing rates and genetic loads from which we computed fitness values. The regression method yielded high statistical power, inbreeding depression being detected as significant (5 % level) in 92 % of the simulations. High individual variation in selfing rate and high mean genetic load led to better detection of inbreeding depression while high among-individual variation in genetic load made it more difficult to detect inbreeding depression. For a constant sampling effort, increasing the number of progenies while decreasing the number of individuals per progeny enhanced the detection power of inbreeding depression. We discuss the implication of among-mother variability of genetic load and selfing rate on inbreeding depression studies.
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http://dx.doi.org/10.1007/s10709-012-9656-7 | DOI Listing |
Genes (Basel)
January 2025
Faculty of Biology, University of Bialystok, Ciołkowskiego 1J Street, 15-245 Białystok, Poland.
Background: The patterns of inbreeding coefficients () and fine spatial genetic structure (FSGS) were evaluated regarding the mating system and inbreeding depression of food-deceptive orchids, , var. , and , from NE Poland.
Methods: We used 455 individuals, representing nine populations of three taxa and AFLPs, to estimate percent polymorphic loci and Nei's gene diversity, which are calculated using the Bayesian method; ; ; FSGS with the pairwise kinship coefficient (); and AMOVA in populations.
Front Genet
January 2025
Escola de Medicina Veterinária e Zootecnia, Universidade Federal da Bahia (UFBA), Salvador, Bahia, Brazil.
The buffalo population raised in Brazil tend to show loss of genetic variability over generations, with significant estimates of inbreeding depression. Besides mating genetically distant individuals, other tools can be used to maintain/increase the genetic variability of the population, such as the use of genotypes. The gene promotes the creation of crossing-over points across the genome, with each allele promoting the creation of a different hotspot.
View Article and Find Full Text PDFTranslocating individuals from multiple source populations is one way to bolster genetic variation and avoid inbreeding in newly established populations. However, mixing isolated populations, especially from islands, can potentially lead to outbreeding depression and/or assortative mating, which may limit interbreeding between source populations. Here, we investigated genetic consequences of mixing individuals from two island populations of the dibbler () in an island translocation.
View Article and Find Full Text PDFAnimal
December 2024
Institute of Animal Sciences, Hungarian University of Agriculture and Life Sciences Institution, 40, Guba S. str., H-7400 Kaposvár, Hungary.
Inbreeding depression (ID) is a well-documented phenomenon associated with reduced fitness and possible extinction. However, ID can be mitigated or even eliminated through the interplay of inbreeding and selection, a process known as purging. The aim of this study was to compare the predictive power of two commonly used approaches in models with and without random dam effects to detect purging (full and reduced models).
View Article and Find Full Text PDFCurr Biol
January 2025
University of Victoria, Department of Biology, Finnerty Road, Victoria, BC V8P 5C2, Canada; The Kelp Rescue Initiative, Bamfield Marine Sciences Centre, Pachena Road, Bamfield, BC V0R 1B0, Canada. Electronic address:
Kelp forests are declining in many parts of the northeast Pacific. In small populations, genetic drift can reduce adaptive variation and increase fixation of recessive deleterious alleles, but natural selection may purge harmful variants. To understand evolutionary dynamics and inform restoration strategies, we investigated genetic structure and the outcomes of genetic drift and purging by sequencing the genomes of 429 bull kelp (Nereocystis luetkeana) and 211 giant kelp (Macrocystis sp.
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