This paper addresses how to calculate and interpret the time-delayed mutual information (TDMI) for a complex, diversely and sparsely measured, possibly non-stationary population of time-series of unknown composition and origin. The primary vehicle used for this analysis is a comparison between the time-delayed mutual information averaged over the population and the time-delayed mutual information of an aggregated population (here, aggregation implies the population is conjoined before any statistical estimates are implemented). Through the use of information theoretic tools, a sequence of practically implementable calculations are detailed that allow for the average and aggregate time-delayed mutual information to be interpreted. Moreover, these calculations can also be used to understand the degree of homo or heterogeneity present in the population. To demonstrate that the proposed methods can be used in nearly any situation, the methods are applied and demonstrated on the time series of glucose measurements from two different subpopulations of individuals from the Columbia University Medical Center electronic health record repository, revealing a picture of the composition of the population as well as physiological features.
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http://dx.doi.org/10.1063/1.3675621 | DOI Listing |
Sci Rep
August 2024
Department of Physics, University of Rome Tor Vergata, 00133, Rome, Italy.
The relationship between solar magnetic activity and solar wind parameters, with observed time-delayed mutual coupling, is an outstanding challenge in space physics. In this study, drawing inspiration from recent observations, we propose a reconciliation framework whose fundamentals stand in the Parker model for solar wind expansion. We investigate the effects on fluctuations in solar wind speed when linearly sustained by an oscillating magnetic solar dynamo described via a modified Van der Pol nonlinear oscillator mimicking the magnetic activity at different timescales.
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May 2024
School of Civil and Transportation Engineering, Henan University of Urban Construction, Pingdingshan, People's Republic of China.
I/II/III mixed mode fractures of intersecting joint fissures often occur in natural rock masses, and jointed rock masses are prone to rockbursts in deep underground engineering when subjected to long-term crustal stresses. However, most studies of the mechanical mechanisms of these intersected joints have been conducted by simplifying two-dimensional joint model tests. Furthermore, the fracture mechanisms of two-dimensional intersected joints under tension and compression are completely different from those of three-dimensional joints.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
April 2024
School of Mathematical Sciences, Shanghai Jiao Tong University, Shanghai 200240, China.
The causal connectivity of a network is often inferred to understand network function. It is arguably acknowledged that the inferred causal connectivity relies on the causality measure one applies, and it may differ from the network's underlying structural connectivity. However, the interpretation of causal connectivity remains to be fully clarified, in particular, how causal connectivity depends on causality measures and how causal connectivity relates to structural connectivity.
View Article and Find Full Text PDFBrief Bioinform
September 2023
School of Computer Science and Engineering, Central South University, Changsha 410083, China.
Gene regulatory network plays a crucial role in controlling the biological processes of living creatures. Deciphering the complex gene regulatory networks from experimental data remains a major challenge in system biology. Recent advances in single-cell RNA sequencing technology bring massive high-resolution data, enabling computational inference of cell-specific gene regulatory networks (GRNs).
View Article and Find Full Text PDFPhys Rev E
June 2023
Department of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom.
We perform feedback experiments and simulations in which a colloidal dumbbell particle, acting as a particle on a ring, is followed by a repulsive optical trap controlled by a continuous-time-delayed feedback protocol. The dynamics are described by a persistent random walk similarly to that of an active Brownian particle, with a transition from predominantly diffusive to driven behavior at a critical delay time. We model the dynamics in the short and long delay regimes using stochastic delay differential equations and derive a condition for stable driven motion.
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