Optimal placement of origins for DNA replication.

Phys Rev Lett

Institute for Complex Systems and Mathematical Biology, SUPA, King's College, University of Aberdeen, Aberdeen 24 3UE, United Kingdom.

Published: February 2012

DNA replication is an essential process in biology and its timing must be robust so that cells can divide properly. Random fluctuations in the formation of replication starting points, called origins, and the subsequent activation of proteins lead to variations in the replication time. We analyze these stochastic properties of DNA and derive the positions of origins corresponding to the minimum replication time. We show that under some conditions the minimization of replication time leads to the grouping of origins, and relate this to experimental data in a number of species showing origin grouping.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3476000PMC
http://dx.doi.org/10.1103/PhysRevLett.108.058101DOI Listing

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