kinITC: a new method for obtaining joint thermodynamic and kinetic data by isothermal titration calorimetry.

J Am Chem Soc

Architecture et Réactivité de l'ARN, Biophysique et Biologie Structurale, Institut de Biologie Moléculaire et Cellulaire du CNRS, Université de Strasbourg, 15, rue René Descartes, 67084 Strasbourg, France.

Published: January 2012

Isothermal titration calorimetry (ITC) is the method of choice for obtaining thermodynamic data on a great variety of systems. Here we show that modern ITC apparatus and new processing methods allow researchers to obtain a complete kinetic description of systems more diverse than previously thought, ranging from simple ligand binding to complex RNA folding. We illustrate these new features with a simple case (HIV-1 reverse transcriptase/inhibitor interaction) and with the more complex case of the folding of a riboswitch triggered by the binding of its ligand. The originality of the new kinITC method lies in its ability to dissect, both thermodynamically and kinetically, the two components: primary ligand binding and subsequent RNA folding. We are not aware of another single method that can yield, in a simple way, such deep insight into a composite process. Our study also rationalizes common observations from daily ITC use.

Download full-text PDF

Source
http://dx.doi.org/10.1021/ja209057dDOI Listing

Publication Analysis

Top Keywords

kinitc method
8
isothermal titration
8
titration calorimetry
8
ligand binding
8
rna folding
8
method obtaining
4
obtaining joint
4
joint thermodynamic
4
thermodynamic kinetic
4
kinetic data
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!