Hydroquinone-1,2-dioxygenase, an enzyme involved in the degradation of alkylphenols in Sphingomonas sp. strain TTNP3 was purified to apparent homogeneity. The extradiol dioxygenase catalyzed the ring fission of hydroquinone to 4-hydroxymuconic semialdehyde and the degradation of chlorinated and several alkylated hydroquinones. The activity of 1 mg of the purified enzyme with unsubstituted hydroquinone was 6.1 μmol per minute, the apparent Km 2.2 μM. ICP-MS analysis revealed an iron content of 1.4 moles per mole enzyme. The enzyme lost activity upon exposure to oxygen, but could be reactivated by Fe(II) in presence of ascorbate. SDS-PAGE analysis of the purified enzyme yielded two bands of an apparent size of 38 kDa and 19 kDa, respectively. Data from MALDI-TOF analyses of peptides of the respective bands matched with the deduced amino acid sequences of two neighboring open reading frames found in genomic DNA of Sphingomonas sp strain TTNP3. The deduced amino acid sequences showed 62% and 47% identity to the large and small subunit of hydroquinone dioxygenase from Pseudomonas fluorescens strain ACB, respectively. This heterotetrameric enzyme is the first of its kind found in a strain of the genus Sphingomonas sensu latu.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3222310PMC
http://dx.doi.org/10.1186/2191-0855-1-8DOI Listing

Publication Analysis

Top Keywords

sphingomonas strain
12
strain ttnp3
12
hydroquinone dioxygenase
8
purified enzyme
8
deduced amino
8
amino acid
8
acid sequences
8
enzyme
6
strain
5
purification characterization
4

Similar Publications

sp. nov., sp. nov. and sp. nov.: three novel species isolated from soil.

Int J Syst Evol Microbiol

December 2024

Department of Bio & Environmental Technology, College of Natural Science, Seoul Women's University, Seoul 01797, Republic of Korea.

Three Gram-negative, aerobic and non-motile bacterial strains, BT552, BT553 and KR1UV-12, were isolated from soil samples in Gwangju-si and Gangneung-si, the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequence showed that strains BT552, BT553 and KR1UV-12 clustered to a distinct clade within the family (order , class ). The strains exhibited the highest genetic similarity with representatives of the genus ; moreover, strains BT552 and BT553 tightly clustered with DAPP-PG 224 (98.

View Article and Find Full Text PDF

A novel gram-stain-indeterminate, rod-shaped, endospore-forming, motile, aerobic bacterium, designated JETA1-E2, was isolated from aircraft fuel Jet A1 sample. The strain showed high pairwise similarity values of partial 16S rRNA gene sequences to Sphingomonas paucimobilis (MT367853) (99.42%), Sphingomonas sanguinis (MF319771) (99.

View Article and Find Full Text PDF

Inoculation with PGPR co-fermented broths promotes growth, yields, and quality of pepper by increasing soil nutrients and changing soil bacterial community.

J Appl Microbiol

November 2024

College of Life Sciences, Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, Guizhou, China.

Aims: The purpose of this study was to explore impacts of different combinations of co-fermentation plant growth-promoting rhizobacteria (PGPR) broth on the growth and yield of pepper.

Methods And Results: The effects of co-fermentation broth containing a random combination of two PGPR strains on the growth of pepper were analyzed. All inoculation treatments promoted growth, yield, and quality of peppers.

View Article and Find Full Text PDF

Identification of (Nematoda: ) infecting Orah ( Blanco) and its impact on rhizosphere microbial dynamics: Guangxi, China.

PeerJ

November 2024

Guangxi Key Laboratory of Agro-Environment and Agric-Products Safety, College of Agriculture, Guangxi University, Nanning, China.

Article Synopsis
  • Root-knot nematode disease significantly impacts the yield and quality of the mandarin variety Blanco "Orah" in Guangxi, China, but its effects on microbial communities are not well understood.
  • The study utilized morphological and molecular methods to identify the nematodes in the rhizosphere of infected plants and found that soil nutrients like organic matter and total nitrogen were higher in sick plants compared to healthy ones.
  • Additionally, the research identified specific bacteria and fungi that were more abundant in the rhizosphere of infected Orah, highlighting potential biocontrol strains and implications for better disease management.
View Article and Find Full Text PDF

Nostoxanthin Biosynthesis by Sphingomonas Species (COS14-R2): Isolation, Identification, and Optimization of Culture Conditions.

Curr Microbiol

November 2024

Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju-Gun, Jeollabuk-Do, 55365, Republic of Korea.

Nostoxanthin, a yellow pigment, belongs to the xanthophyll group of carotenoids found in various species of bacteria and cyanobacteria. Several species of Sphingomonas can produce appropriate carotenoids for survive in various environments. This comprise nostoxanthin, a significant carotenoid.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!