The ring-opening reaction of the cyclopropylcarbinyl radical proceeds via heavy-atom tunneling at low temperature. We used instanton theory to calculate tunneling rates and kinetic isotope effects with on-the-fly calculation of energies by density functional theory (B3LYP). The accuracy was verified by explicitly correlated coupled-cluster calculations (UCCSD(T)-F12). At cryogenic temperatures, we found protium/deuterium KIEs up to 13 and inverse KIEs down to 0.2. We also studied an intramolecular tautomerization reaction. A simple and computationally efficient method is proposed to calculate KIEs with the instanton method: the instanton path is assumed to be independent of the atomic masses. This results in surprisingly good estimates of the KIEs for the cyclopropylcarbinyl radical and for the secondary KIEs of the tautomerization. Challenges and capabilities of the instanton method for calculating KIEs are discussed.
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http://dx.doi.org/10.1002/jcc.21930 | DOI Listing |
We show that a large class of satellite operators are rank-expanding; that is, they map some rank-one subgroup of the concordance group onto an infinite linearly independent set. Our work constitutes the first systematic study of this property in the literature and partially affirms a conjecture of the second author and Pinzón-Caicedo. More generally, we establish a Floer-theoretic condition for a family of companion knots to have infinite-rank image under satellites from this class.
View Article and Find Full Text PDFJ Chem Phys
November 2024
Simons Center for Computational Physical Chemistry, New York University, New York, New York 10003, USA and Department of Chemistry, New York University, New York, New York 10003, USA.
Instanton theory relates the rate constant for tunneling through a barrier to the periodic classical trajectory on the upturned potential energy surface, whose period is τ = ℏ/(kBT). Unfortunately, the standard theory is only applicable below the "crossover temperature," where the periodic orbit first appears. This paper presents a rigorous semiclassical (ℏ → 0) theory for the rate that is valid at any temperature.
View Article and Find Full Text PDFJ Chem Phys
July 2024
Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom.
We investigate whether making the friction spatially dependent on the reaction coordinate introduces quantum effects into the thermal reaction rates for dissipative reactions. Quantum rates are calculated using the numerically exact multi-configuration time-dependent Hartree method, as well as the approximate ring-polymer molecular dynamics (RPMD), ring-polymer instanton methods, and classical molecular dynamics. By conducting simulations across a wide range of temperatures and friction strengths, we can identify the various regimes that govern the reactive dynamics.
View Article and Find Full Text PDFNat Commun
May 2024
Department of Chemistry and Applied Biosciences, ETH Zürich, 8093, Zürich, Switzerland.
The reactive singlet state of oxygen (O) can decay to the triplet ground state nonradiatively in the presence of a solvent. There is a controversy about whether tunnelling is involved in this nonadiabatic spin-crossover process. Semiclassical instanton theory provides a reliable and practical computational method for elucidating the reaction mechanism and can account for nuclear quantum effects such as zero-point energy and multidimensional tunnelling.
View Article and Find Full Text PDFJ Chem Theory Comput
May 2024
Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich 8093, Switzerland.
Simulation of surface processes is a key part of computational chemistry that offers atomic-scale insights into mechanisms of heterogeneous catalysis, diffusion dynamics, and quantum tunneling phenomena. The most common theoretical approaches involve optimization of reaction pathways, including semiclassical tunneling pathways (called instantons). The computational effort can be demanding, especially for instanton optimizations with an ab initio electronic structure.
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