γ-AApeptides bind to RNA by mimicking RNA-binding proteins.

Org Biomol Chem

Department of Chemistry, University of South Florida, 4202 E. Fowler Ave., Tampa, FL 33620, USA.

Published: October 2011

The interactions between proteins and RNAs are of vital importance for many cellular processes, including transcription and processing of RNA, translation, and viral infections. Here we report an γ-AApeptide that can mimic HIV-1 Tat protein and bind to TAR RNAs of HIV and BIV with nanomolar affinity, comparable to that of the RNA-binding fragment of Tat (amino acids 49-58). The interaction is resistant to the presence of a large excess of tRNA. With resistance to proteolytic hydrolysis and limitless potential for diversification, γ-AApeptides may emerge as a new class of peptidomimetics to modulate RNA-protein interactions.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3814216PMC
http://dx.doi.org/10.1039/c1ob05738cDOI Listing

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