Single cell transcriptomics of neighboring hyphae of Aspergillus niger.

Genome Biol

Microbiology and Kluyver Centre for Genomics of Industrial Fermentations, Institute of Biomembranes, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.

Published: August 2011

Single cell profiling was performed to assess differences in RNA accumulation in neighboring hyphae of the fungus Aspergillus niger. A protocol was developed to isolate and amplify RNA from single hyphae or parts thereof. Microarray analysis resulted in a present call for 4 to 7% of the A. niger genes, of which 12% showed heterogeneous RNA levels. These genes belonged to a wide range of gene categories.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245611PMC
http://dx.doi.org/10.1186/gb-2011-12-8-r71DOI Listing

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