Expression of cyclic adenosine monophosphate-specific phosphodiesterase 7B (PDE7B) mRNA is increased in patients with chronic lymphocytic leukemia (CLL), thus suggesting that variation may occur in the PDE7B gene in CLL. As genetic variation in other PDE family members has been shown to associate with numerous clinical disorders (reviewed in this manuscript), we sought to identify single-nucleotide polymorphisms (SNPs) in the PDE7B gene promoter and coding region of 93 control subjects and 154 CLL patients. We found that the PDE7B gene has a 5' non-coding region SNP -347C>T that occurs with similar frequency in CLL patients (1.9%) and controls (2.7%). Tested in vitro, -347C>T has less promoter activity than a wild-type construct. The low frequency of this 5' untranslated region variant indicates that it does not explain the higher PDE7B expression in patients with CLL but it has the potential to influence other settings that involve a role for PDE7B.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3833258PMC
http://dx.doi.org/10.1038/jhg.2011.80DOI Listing

Publication Analysis

Top Keywords

pde7b gene
12
genetic variation
8
chronic lymphocytic
8
lymphocytic leukemia
8
cll patients
8
pde7b
6
cll
5
variation phosphodiesterase
4
phosphodiesterase pde
4
pde chronic
4

Similar Publications

Background: Liver cancer presents a significant challenge to global health and is currently ranked as the sixth most common form of cancer worldwide. Recent research indicates that phosphodiesterases play a role in various physiological and pathological processes, with a specific focus on their impact on cancer advancement. There is a scarcity of studies investigating the function and mechanisms of phosphodiesterases in the development and progression of hepatocellular carcinoma (HCC).

View Article and Find Full Text PDF

Influence of dexamethasone-induced matrices on the TM transcriptome.

Exp Eye Res

November 2024

Department of Cellular Biology and Anatomy, Augusta University, Augusta, GA, United States; James and Jean Culver Vision Discovery Institute, Augusta University, Augusta, GA, United States; Center for Biotechnology and Genomic Medicine, Augusta University, Augusta, GA, United States. Electronic address:

Article Synopsis
  • The study investigates how the extracellular matrix (ECM) interacts with trabecular meshwork (TM) cells in the eye, particularly focusing on its role in causing ocular hypertension and glaucoma-like changes due to dexamethasone treatment.
  • Researchers created an in vitro model using primary TM cells isolated from non-glaucoma donors and analyzed gene expression after treating these cells with ECM derived from dexamethasone-treated cultures.
  • They identified 402 differentially expressed genes related to glaucoma pathogenesis, which are involved in inflammation, signaling, matrix remodeling, and angiogenesis, highlighting the complex cellular interactions that can lead to increased eye pressure.
View Article and Find Full Text PDF

Methylation-regulated tumor suppressor gene PDE7B promotes HCC invasion and metastasis through the PI3K/AKT signaling pathway.

BMC Cancer

May 2024

Department of Epidemiology and Health Statistics, School of Public Health, Guilin Medical University, Huan Cheng North 2nd Road 109, Guilin, Guangxi, 541004, China.

Article Synopsis
  • Hepatocellular carcinoma (HCC) is a deadly liver cancer with unclear development mechanisms, where inactivated tumor suppressor genes, particularly due to DNA methylation, may be influential.
  • The study utilized whole genome bisulfite sequencing and RNA sequencing to analyze DNA methylation patterns in HCC, focusing on phosphodiesterase 7B (PDE7B) for further investigation.
  • Results showed a hypomethylation pattern in HCC, with PDE7B being significantly down-regulated in cancer tissues, correlating with poorer patient outcomes, highlighting its potential as a biomarker and therapeutic target.
View Article and Find Full Text PDF

Differential RNA Expression Between Metastatic and Primary Neuroblastoma Cells.

J Surg Res

June 2024

Division of Pediatric Surgery, Children's Hospital Los Angeles, Los Angeles, California; Division of Pediatric Surgery, Cedars-Sinai Medical Center, Los Angeles, California; Department of Surgery, Keck School of Medicine, University of Southern California, Los Angeles, California. Electronic address:

Introduction: Neuroblastoma (NB) is the most common extra-cranial malignancy in children. Poor survival in high-risk NB is attributed to recurrent metastatic disease. To better study metastatic disease, we used a novel mouse model to investigate differential gene expression between primary tumor cells and metastatic cells.

View Article and Find Full Text PDF

Fat infiltration in skeletal muscle is now recognized as a standard feature of aging and is directly related to the decline in muscle function. However, there is still a limited systematic integration and exploration of the mechanisms underlying the occurrence of myosteatosis in aging across species. Here, we re-analyzed bulk RNA-seq datasets to investigate the association between fat infiltration in skeletal muscle and aging.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!