Tri- and tetranucleotide microsatellites in dhufish Glaucosoma hebracium (Perciformes).

Mol Ecol Resour

CSIRO Marine & Atmospheric Research, Private Bag 5, Wembley, WA 6913, Australia CSIRO Marine & Atmospheric Research, GPO Box 1538, Hobart, Tas. 7001, Australia.

Published: May 2009

Thirteen polymorphic tri- and tetranucleotide microsatellite markers are reported for the exploited marine dhufish (Glaucosoma hebracium) from southwestern Australia. Variation was assessed among 48 individuals collected from a single locality. Most loci had 2-5 alleles, although one had more than 20 alleles, with corresponding observed heterozygosities of 0.02-0.81. These loci were also polymorphic in congeneric species.

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1755-0998.2008.02508.xDOI Listing

Publication Analysis

Top Keywords

tri- tetranucleotide
8
dhufish glaucosoma
8
glaucosoma hebracium
8
tetranucleotide microsatellites
4
microsatellites dhufish
4
hebracium perciformes
4
perciformes thirteen
4
thirteen polymorphic
4
polymorphic tri-
4
tetranucleotide microsatellite
4

Similar Publications

Objective: The ghost crab Ocypode stimpsoni (Decapoda) is designated as a protected marine species in Korea due to its declining population. In this study, we successfully identified 17 microsatellite markers for O. stimpsoni through next-generation sequencing.

View Article and Find Full Text PDF

Evaluation and characteristic analysis of SSRs from the transcriptomic sequences of Perilla crop (Perilla frutescens L.).

Gene

January 2025

Department of Applied Plant Sciences, College of Agriculture and Life Sciences, Kangwon National University, Chuncheon 24341, South Korea; Interdisciplinary Program in Smart Agriculture, Kangwon National University, Chuncheon 24341, South Korea. Electronic address:

Perilla crop is a self-fertilizing annual plant, cultivated and used mainly in East Asia. Perilla frutescens var. frutescens seeds are rich in unsaturated fatty acids, which have health benefits, and Perilla frutescens var.

View Article and Find Full Text PDF

is a fast-growing leguminous tree that is widely cultivated in tropical areas such as Indonesia, Malaysia, Australia, and southern China. This tree has versatile utility in timber, furniture, and pulp production. Illumina sequencing of was conducted, and the raw data of 124,410,892 reads were filtered and assembled into 93,317 unigenes, with a total of 84,411,793 bases.

View Article and Find Full Text PDF

EST-SSR Identification and Development through EST Sequences from Rottb. for Genetic Diversity Analysis.

Trop Life Sci Res

March 2024

Research Centre for Energy Convention and Conservation, National Research and Innovation Agency, Science and Technology Park of B.J. Habibie, Serpong, South Tangerang 15314, Indonesia.

Sago plant ( Rottb.) is one of the most carbohydrate-producing plants in the world. Microsatellites or simple sequence repeats (SSRs) play an important role in the genome and are used extensively compared to other molecular markers.

View Article and Find Full Text PDF

The Hanwoo traceability system currently utilizes 11 dinucleotide repeat microsatellite (MS) markers. However, dinucleotide repeat markers are known to have a high incidence of polymerase chain reaction (PCR) artifacts, such as stutter bands, which can complicate the accurate reading of alleles. In this study, we examined the polymorphisms of the 11 dinucleotide repeat MS markers currently employed in traceability systems.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!