Most rare species appear to be specialists in plant-pollinator networks. This observation could result either from real ecological processes or from sampling artifacts. Several methods have been proposed to overcome these artifacts, but they have the limitation of being based on visitation data, causing interactions involving rare visitor species to remain undersampled. We propose the analysis of food composition in bee trap nests to assess the reliability of network specialization estimates. We compared data from a plant-pollinator network in the Monte Desert of Villavicencio Nature Reserve, Argentina, sampled by visit observation, and data from trap nests sampled at the same time and location. Our study shows that trap nest sampling was good for estimating rare species degree. The rare species in the networks appear to be more specialized than they really are, and the bias in the estimation of the species degree increases with the rareness. The low species degree of these rare species in the visitation networks results from insufficient sampling of the rare interactions, which could have important consequences for network structure.
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http://dx.doi.org/10.1890/10-0794.1 | DOI Listing |
Nature
January 2025
National Disease Research Interchange, Philadelphia, PA, USA.
Many human diseases are the result of early developmental defects. As most paediatric diseases and disorders are rare, children are critically underrepresented in research. Functional genomics studies primarily rely on adult tissues and lack critical cell states in specific developmental windows.
View Article and Find Full Text PDFSci Rep
January 2025
Department of Botany and Evolutionary Ecology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10‑727, Olsztyn, Poland.
The liverwort Arnellia fennica has a circumarctic distribution with disjunct and scarce localities in the Alps, Carpathians, and Pyrenees. Within the Carpathians, it is only known from the Tatra Mountains (in Poland), where so far only four occurrences have been documented in the forest belt of the limestone part of the Western Tatras. The species is considered a tertiary relict, which owes its survival during the last glaciation period to low-lying locations in areas not covered by ice.
View Article and Find Full Text PDFJ Infect Public Health
January 2025
Department of Clinical Laboratory, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China. Electronic address:
Background: Nontuberculous mycobacteria (NTM) are emerging pathogens responsible for increasing skin and soft tissue infections (SSTIs) globally. However, the diagnosis and treatment of NTM SSTIs face significant challenges due to the lack of standardized guidelines. This study reviewed the clinical characteristics, diagnostic challenges, and treatment outcomes of NTM SSTIs in a large cohort from a tertiary referral center in Beijing, China.
View Article and Find Full Text PDFEcology
January 2025
Key Laboratory of Southwest China Wildlife Resources Conservation (Ministry of Education), China West Normal University, Nanchong, China.
Understanding the patterns and drivers of species range shifts is essential to disentangle mechanisms driving species' responses to global change. Here, we quantified local extinction and colonization dynamics of giant pandas (Ailuropoda melanoleuca) using occurrence data collected by harnessing the labor of >1000 workers and >60,000 worker days for each of the three periods (TP1: 1985-1988, TP2: 1998-2002, and TP3: 2011-2014), and evaluated how these patterns were associated with (1) protected area, (2) local rarity/abundance, and (3) abiotic factors (i.e.
View Article and Find Full Text PDFForensic Sci Int
January 2025
Institute of Rare Diseases, West China Hospital of Sichuan University, Sichuan University, Chengdu 610000, China; Center for Archaeological Science, Sichuan University, Chengdu 610000, China; Department of Forensic Medicine, College of Basic Medicine, Chongqing Medical University, Chongqing 400331, China. Electronic address:
The Human Pangenome Reference Consortium, the Chinese Pangenome Consortium, and other plant and animal pangenome projects have announced the completion of pilot work aimed at constructing high-quality, haplotype-resolved reference graph genomes representative of global ethno-linguistically different populations or different plant and animal species. These graph-based, gapless pangenome references, which are enriched in terms of genomic diversity, completeness, and contiguity, have the potential for enhancing long-read sequencing (LRS)-based genomic research, as well as improving mappability and variant genotyping on traditional short-read sequencing platforms. We comprehensively discuss the advancements in pangenome-based genomic integrative genomic discoveries across forensic-related species (humans, animals, and plants) and summarize their applications in variant identification and forensic genomics, epigenetics, transcriptomics, and microbiome research.
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