POLIR, a polarizable water potential optimized for vibrational and intermolecular spectroscopy in pure water but not optimized for solvation, is used to describe solutions of the divalent metal cations Ca(2+), Mg(2+), and Cu(2+). The spectral shifts in the O-H stretch region obtained from classical simulations are in agreement with experiment. The water-ion binding energies are dominated by classical electrostatics, even though the Cu(2+) case might be considered to involve an intermediate-strength chemical bond. Three-body energies of the ion with the first solvation shell are in agreement with ab initio calculations. Our results indicate the importance of polarization in the development of accurate, transferable, force fields and the power of classical methods when it is carefully included.
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Theory Biosci
January 2025
Faculty of Science and Engineering, Department of Biosciences, Swansea University, Singleton Park, Swansea, SA2 8PP, UK.
Despite being a powerful tool to model ecological interactions, traditional evolutionary game theory can still be largely improved in the context of population dynamics. One of the current challenges is to devise a cohesive theoretical framework for ecological games with density-dependent (or concentration-dependent) evolution, especially one defined by individual-level events. In this work, I use the notation of reaction networks as a foundation to propose a framework and show that classic two-strategy games are a particular case of the theory.
View Article and Find Full Text PDFNat Commun
January 2025
Department of Earth Sciences, University College London, London, UK.
Earthquakes are produced by the propagation of rapid slip along tectonic faults. The propagation dynamics is governed by a balance between elastic stored energy in the surrounding rock, and dissipated energy at the propagating tip of the slipping patch. Energy dissipation is dictated by the mechanical behaviour of the fault, which is itself the result of feedbacks between thermo-hydro-mechanical processes acting at the mm to sub-mm scale.
View Article and Find Full Text PDFLight Sci Appl
January 2025
Laboratoire Matériaux et Phénomènes Quantiques, Université Paris Cité and CNRS, Paris, 75013, France.
Vortex beams are currently drawing a great deal of interest, from fundamental research to several promising applications. While their generation in bulky optical devices limits their use in integrated complex systems, metasurfaces have recently proven successful in creating optical vortices, especially in the linear regime. In the nonlinear domain, of strategic importance for the future of classical and quantum information, to date orbital angular momentum has only been created in qualitative ways, without discussing discrepancies between design and experimental results.
View Article and Find Full Text PDFNat Commun
January 2025
Department of Civil and Environmental Engineering, Rice University, Houston, TX, USA.
Gypsum (CaSO·2HO) plays a critical role in numerous natural and industrial processes. Nevertheless, the underlying mechanisms governing the formation of gypsum crystals on surfaces with diverse chemical properties remain poorly understood due to a lack of sufficient temporal-spatial resolution. Herein, we use in situ microscopy to investigate the real-time gypsum nucleation on self-assembled monolayers (SAMs) terminated with -CH, -hybrid (a combination of NH and COOH), -COOH, -SO, -NH, and -OH functional groups.
View Article and Find Full Text PDFMillions of women worldwide have breast cancer, a common and possibly fatal illness according to WHO Reports. A genetic mutation usually causes breast adenocarcinomas. Only 5-10% of cancers are induced by genetic mutations that develop with age, and the "wear and tear" of general life causes 85-90% of breast cancers.
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