With the clinical implementation of genomic microarrays, the detection of cryptic unbalanced rearrangements in patients with syndromic developmental delay has improved considerably. Here we report the molecular karyotyping and phenotypic description of six new unrelated patients with partially overlapping microdeletions at 10p12.31p11.21 ranging from 1.0 to 10.6 Mb. The smallest region of overlap is 306 kb, which includes WAC gene, known to be associated with microtubule function and to have a role in cell division. Another patient has previously been described with a 10 Mb deletion, partially overlapping with our six patients. All seven patients have developmental delay and a majority of the patients have abnormal behaviour and dysmorphic features, including bulbous nasal tip, deep set eyes, synophrys/thick eyebrows and full cheeks, whereas other features varied. All patients also displayed various visual impairments and six out of seven patients had cardiac malformations. Taken together with the previously reported patient, our study suggests that the detected deletions may represent a new contiguous gene syndrome caused by dosage-sensitive genes that predispose to developmental delay.
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http://dx.doi.org/10.1038/ejhg.2011.71 | DOI Listing |
Proc Natl Acad Sci U S A
January 2025
Department of Computer Science, University of Haifa, Haifa 3303221, Israel.
Selective pressure acts on the codon use, optimizing multiple, overlapping signals that are only partially understood. We trained AI models to predict codons given their amino acid sequence in the eukaryotes and and the bacteria and to study the extent to which we can learn patterns in naturally occurring codons to improve predictions. We trained our models on a subset of the proteins and evaluated their predictions on large, separate sets of proteins of varying lengths and expression levels.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
January 2025
Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, Université Toulouse III Paul Sabatier, Institut National Polytechnique Toulouse, Castanet-Tolosan 31320, France.
Plants have colonized lands 450 million years ago. This terrestrialization was facilitated by developmental and functional innovations. Recent evo-devo approaches have demonstrated that one of these innovations was the mutualistic arbuscular mycorrhizal symbiosis (AMS).
View Article and Find Full Text PDFWorld J Surg
December 2024
Monash University Endocrine Surgery Unit, Department of General Surgery, Alfred Hospital, Melbourne, Victoria, Australia.
Background: Despite widespread use of standardized classification systems, risk stratification of thyroid nodules is nuanced and often requires diagnostic surgery. Genomic sequencing is available for this dilemma however, costs and access restricts global applicability. Artificial intelligence (AI) has the potential to overcome this issue nevertheless, the need for black-box interpretability is pertinent.
View Article and Find Full Text PDFChemosphere
December 2024
Lab of Public Health, Medical School, University of Patras, GR-26504, Greece. Electronic address:
This ecological study examines cancer mortality rates in 61 rural Greek municipalities, covering in total 7,305,554 person-years from 2000 to 2015, based on the Hellenic Statistical Authority data. Topsoil concentrations of Mn, Ni, Pb, Be, As and Cd in Greek grazing land samples were obtained from the GEMAS (Geochemical Mapping of Agricultural and Grazing land Soil) project. Municipalities of rural regions with population of up to 20,000 people were selected as the study area and were divided into four quartiles, according to their age-specific cancer mortality rates, to identify the most divergent areas of low/high mortality.
View Article and Find Full Text PDFPathol Res Pract
December 2024
Department of Medicine - DIMED, University of Padova, Padova, Italy; Department of Pathology, Azienda ULSS2 Marca Trevigiana, Treviso, Italy. Electronic address:
Background: RAS/BRAF mutations, mismatch DNA repair complex deficiency (MMRd)/microsatellite instability (MSI), and CpG methylator phenotype (CIMP) are key molecular actors in colorectal carcinogenesis. To date, conflicting evidence about the correlations between these molecular features has been reported.
Materials And Methods: A retrospectively selected cohort of 123 CRCs was divided into 3 groups based on the molecular characteristics: MMR proficient (MMRp)/BRAF p.
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