SSR marker-based DNA fingerprinting and cultivar identification of olives (Olea europaea).

Biochem Genet

Department of Horticulture, Faculty of Agriculture, Ataturk University, 25240 Erzurum, Turkey.

Published: October 2011

Four well-known commercial olive cultivars (Domat, Edremit, Gemlik, and Memecik) and six local cultivars (Ziraat, Isrange, Tuz, Patos, Yag, and Marantelli) from northeastern Turkey were analyzed for genetic diversity and relationships using seven SSR primers (DCA-4, DCA-09, DCA-11, DCA-16, DCA-17, GAPU-89, UDO-14). The number of markers ranged from 3 (DCA-04 and DCA-17) to 6 (DCA-11, DCA-16, GAPU-89), with an average of 4.57 alleles per primer. UPGMA cluster analysis based on a simple matching similarity matrix grouped cultivars into two main clusters. Three pairs of cultivars (Ziraat and Gemlik, Isrange and Tuz, and Patos and Yag) were thought to be different cultivars although they produced identical SSR profiles. The results indicate the efficiency of SSR markers for evaluation of genetic diversity in olives and identification of misnamed individuals of the same genotype.

Download full-text PDF

Source
http://dx.doi.org/10.1007/s10528-011-9430-zDOI Listing

Publication Analysis

Top Keywords

cultivars ziraat
8
isrange tuz
8
tuz patos
8
patos yag
8
genetic diversity
8
dca-11 dca-16
8
cultivars
5
ssr
4
ssr marker-based
4
marker-based dna
4

Similar Publications

Sweet cherry fruit nutritional profile modulation and molecular docking studies of major compounds.

Food Chem

February 2025

Department of Horticulture, Faculty of Agriculture, Usak University, 64000 Usak, Türkiye. Electronic address:

This research was conducted to determine how the altitude difference affects the fruit quality in sweet cherries by using different cultivars (Kordia, Regina, Sweetheart, and 0900 Ziraat) grown at two different altitudes (200 m, 800 m) in Eskişehir (Türkiye) for two consecutive years. Malic acid and chlorogenic acid, which stood out as the major organic acid and phenolic, respectively were found to be at 9039.17 mg·L and 64.

View Article and Find Full Text PDF

Background: Fruit cracking impacts the quality of sweet cherry, significantly affecting its marketability due to increased susceptibility to injury, aesthetic flaws, and susceptibility to pathogens. The effect of 1% biofilm (Parka™) application regimes on fruit cracking and other quality parameters in the '0900 Ziraat' cherry cultivar was investigated in this study. Fruit sprayed with water were served as control (U1).

View Article and Find Full Text PDF

Sorghum is emerging as a model crop for functional genetics and genomics of tropical grasses with abundant uses, including food, feed, and fuel, among others. It is currently the fifth most significant primary cereal crop. Crops are subjected to various biotic and abiotic stresses, which negatively impact on agricultural production.

View Article and Find Full Text PDF

The aim of this study is to investigate the phytochemical contents and antibacterial properties of 2-year Prunus avium L. standard cultivars [Cristalina (Cr), 0900 Ziraat (Zr)] and to elucidate the mechanism of action of the extracts on the quorum sensing (QS) system by using homology modelling and molecular docking. Phenolic contents of methanol extract of Cr and Zr stalks were detected by HPLC.

View Article and Find Full Text PDF

The gene Yr5 in wheat has generally been known to confer resistance to Puccinia striiformis f. sp. tritici races worldwide.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!