We demonstrate that period-doubled discrete breathers appear from the anticontinuum limit of the driven Peyrard-Bishop-Dauxois model of DNA. These novel breathers result from a stability overlap between subharmonic solutions of the driven Morse oscillator. Subharmonic breathers exist whenever a stability overlap is present within the Feigenbaum cascade to chaos and therefore an entire cascade of such breathers exists. This phenomenon is present in any driven lattice where the on-site potential admits subharmonic solutions. In DNA these breathers may have ramifications for cellular gene expression.
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http://dx.doi.org/10.1103/PhysRevE.83.011904 | DOI Listing |
Chaos
August 2023
Département de Physique Théorique and Section de Mathématiques, University of Geneva, Geneva, Switzerland.
This paper is an adaptation of the introduction to a book project by the late Mitchell J. Feigenbaum (1944-2019). While Feigenbaum is certainly mostly known for his theory of period doubling cascades, he had a lifelong interest in optics.
View Article and Find Full Text PDFPhys Rev E
October 2023
Biofisika Institutua (UPV/EHU, CSIC) and Fundación Biofísica Bizkaia, Leioa E-48940, Spain.
The emergence of collective oscillations and synchronization is a widespread phenomenon in complex systems. While widely studied in the setting of dynamical systems, this phenomenon is not well understood in the context of out-of-equilibrium phase transitions in many-body systems. Here we consider three classical lattice models, namely the Ising, the Blume-Capel, and the Potts models, provided with a feedback among the order and control parameters.
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September 2023
International Research and Educational Centre for Physics of Nanostructures, ITMO University, Kronverksky Prospekt 49, Bldg. A, St. Petersburg 197101, Russia.
We have numerically investigated the dynamics of charged microparticles in a "five-wire" surface radio-frequency trap. The period-doubling bifurcation conditions have been shown to depend on the particle, the trap, and the alternating voltage parameters. For a comprehensive study of the dynamics chaotization through a cascade of period doubling, we have used Fourier analysis of a particle trajectory as well as the calculations of a non-trivial Lyapunov exponent map.
View Article and Find Full Text PDFChaos
September 2023
Institute of Physics, Saratov State University, Astrakhanskaya str. 83, 410012 Saratov, Russia.
Typically, the period-doubling bifurcations exhibited by nonlinear dissipative systems are observed when varying systems' parameters. In contrast, the period-doubling bifurcations considered in the current research are induced by changing the initial conditions, whereas parameter values are fixed. Thus, the studied bifurcations can be classified as the period-doubling bifurcations without parameters.
View Article and Find Full Text PDFPhys Rev E
May 2023
Nonlinear Dynamics, Chaos and Complex Systems Group, Departamento de Física, Universidad Rey Juan Carlos, Tulipán s/n, 28933 Móstoles, Madrid, Spain.
In this paper, we show that the destruction of the main Kolmogorov-Arnold-Moser (KAM) islands in two-degree-of-freedom Hamiltonian systems occurs through a cascade of period-doubling bifurcations. We calculate the corresponding Feigenbaum constant and the accumulation point of the period-doubling sequence. By means of a systematic grid search on exit basin diagrams, we find the existence of numerous very small KAM islands ("islets") for values below and above the aforementioned accumulation point.
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