Wavelength-selective uncaging of dA and dC residues.

Org Lett

Cluster of Excellence Macromolecular Complexes, Goethe University of Frankfurt, Max-von-Laue-Str. 9, 60438 Frankfurt (M), Germany.

Published: March 2011

Nitrodibenzofuran (NDBF) groups are used as photolabile "caging" groups to temporarily mask the Watson-Crick interaction of dA and dC residues. They show improved masking capabilities and are photodeprotected 12 times more efficiently than 1-(o-nitrophenyl)-ethyl (NPE) caging groups in these positions. Furthermore, NDBF groups can be removed wavelength-selectively in the presence of NPE groups. This will allow more complex (un)caging strategies of oligonucleotides--beyond the usual irreversible triggering.

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Source
http://dx.doi.org/10.1021/ol200141vDOI Listing

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