Identification of protein-coding regions using Modified Gabor-Wavelet Transform with Signal Boosting Technique.

Int J Comput Biol Drug Des

Department of Electronics and Communication Engineering, Motilal Nehru National Institute of Technology, Allahabad 211004, Uttar Pradesh, India.

Published: May 2011

Modified Gabor-Wavelet Transform (MGWT) has been previously used for identification of protein coding regions. This method does not significantly suppress the non-coding regions which may result incorrect identification. To enhance the discrimination between the coding and non-coding regions of the DNA sequence, Signal Boosting Technique (SBT) is applied on the projection coefficients which are obtained by applying MGWT. The performance of the proposed Modified Gabor-Wavelet Transform with Signal Boosting Technique (MGWT-SBT) is compared with other existing methods such as MGWT, Short-Time Discrete Fourier Transform (ST-DFT), anti-notch filter and multi-stage filter. Results show that the proposed method gives better identification accuracy as compared to other methods.

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http://dx.doi.org/10.1504/IJCBDD.2010.038391DOI Listing

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Identification of protein-coding regions using Modified Gabor-Wavelet Transform with Signal Boosting Technique.

Int J Comput Biol Drug Des

May 2011

Department of Electronics and Communication Engineering, Motilal Nehru National Institute of Technology, Allahabad 211004, Uttar Pradesh, India.

Modified Gabor-Wavelet Transform (MGWT) has been previously used for identification of protein coding regions. This method does not significantly suppress the non-coding regions which may result incorrect identification. To enhance the discrimination between the coding and non-coding regions of the DNA sequence, Signal Boosting Technique (SBT) is applied on the projection coefficients which are obtained by applying MGWT.

View Article and Find Full Text PDF

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