In silico characterization of thermostable lipases.

Extremophiles

Department of Biotechnology, Indian Institute of Technology, Guwahati 781039, Assam, India.

Published: January 2011

Thermostable lipases are of high priority for industrial applications as they are endowed with the capability of carrying out diversified reactions at elevated temperatures. Extremophiles are their potential source. Sequence and structure annotation of thermostable lipases can elucidate evolution of lipases from their mesophilic counterparts with enhanced thermostability hence better industrial potential. Sequence analysis highlighted the conserved residues in bacterial and fungal thermostable lipases. Higher frequency of AXXXA motif and poly Ala residues in lid domain of thermostable Bacillus lipases were distinguishing characteristics. Comparison of amino acid composition among thermostable and mesostable lipases brought into light the role of neutral, charged and aromatic amino acid residues in enhancement of thermostability. Structural annotation of thermostable lipases with that of mesostable lipases revealed some striking features which are increment of gamma turns in thermostable lipases; being first time reported in our paper, longer beta strands, lesser beta-branched residues in helices, increase in charged-neutral hydrogen bonding pair, hydrophobic-hydrophobic contact and differences in the N-cap and C-cap residues of the α helices. Conclusively, it can be stated that subtle changes in the arrangement of amino acid residues in the tertiary structure of lipases contributes to enhanced thermostability.

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00792-010-0337-0DOI Listing

Publication Analysis

Top Keywords

thermostable lipases
24
amino acid
12
lipases
11
thermostable
8
annotation thermostable
8
enhanced thermostability
8
mesostable lipases
8
acid residues
8
residues helices
8
residues
6

Similar Publications

Removal of phthalate esters by integrated adsorption and biodegradation using improved performance of lipase@MOFs.

Environ Pollut

December 2024

Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, China. Electronic address:

Phthalate esters (PAEs) are broadly utilized as plasticizers in industrial products, posing a significant threat to ecological security and human health. Lipase is a kind of green biocatalyst with the ability to degrade PAEs, but its application is limited due to its low stability and poor reusability. Herein, lipase from Candida rugosa (CRL) was immobilized into an organic ligand replacement MOFs (MAF-507) and cysteine modification and glutaraldehyde cross-linking were simultaneously performed to synthesize immobilized lipase (Cys-CRL@GA@MAF-507) using a one-pot method.

View Article and Find Full Text PDF

Combined fermentation and ARTP mutagenesis to enhance lipase activity of Penicillium camembertii and its application for high-purity 1,3-diacylglycerol preparation.

Food Chem

February 2025

Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources; Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-Forest Biomass; College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, PR China. Electronic address:

Penicillium camembertii lipase (PCL) is a glycerol-biased enzyme isolated from P. camembertii, exhibiting high esterification activity. The PCL activity was enhanced by combining fermentation optimization with atmospheric and room temperature plasma (ARTP) mutagenesis.

View Article and Find Full Text PDF

Enzyme stability and activity are pivotal factors for their implementation in different industrial applications. Enzyme supramolecular engineering relies on the fabrication of a tailor-made enzyme nano-environment to ensure enzyme stability without impairing activity. Cyclodextrins (CDs), cyclic oligomers of glucose, act as protein chaperones and stabilize, upon interaction with hydrophobic amino acid residues exposed at the protein surface, its three-dimensional structure.

View Article and Find Full Text PDF
Article Synopsis
  • Scorpion venom is rich in biologically active peptides and proteins, leading researchers to analyze the venom gland transcriptome of a specific Iranian scorpion to explore medicinal applications and antivenom production.
  • The study used advanced techniques such as Illumina RNA-Seq and bioinformatics to provide a high-quality assembly of 101,180 transcripts from the venom gland, showing a significant presence of complete arthropod BUSCOs.
  • The analysis identified a variety of active peptides and proteins relevant to neurology and inflammation, including ion channel inhibitors, neurotoxins, and different isoforms of a specific venom peptide named HzLVP1.
View Article and Find Full Text PDF

Functional characterization of Staphylococcus aureus lipase 2 (SAL2) as a collagen adhesin.

Biophys Chem

February 2025

Centre of Advanced Study in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai 600 025, India. Electronic address:

Extracellular lipases of many pathogens have been characterized as human virulence factors. Staphylococcus aureus produces a variety of enzymes that aid in the pathogenesis of the bacterium to invade and destroy host tissues, resulting in a wide range of clinical illnesses. The lipase is one such enzyme, and the lipases produced by S.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!