Acomys, also called spiny mice, were once used as a diabetes model. We have recently demonstrated that the closest relatives to the Acomys, members of the family Gerbillinae, lack the transcription factor Pdx-1. Therefore, we sought to determine if members of this family also lack Pdx-1, and describe the pancreatic morphology in three different species of Acomys: Acomys cahirinus (Egyptian spiny mouse), Acomys cilicicus (Asia Minor spiny mouse) and Acomys dimidiatus (eastern spiny mouse). We successfully cloned the Acomys Pdx-1 gene and we demonstrate by immunocytochemistry that the Pdx-1 protein is expressed in the pancreatic insulin immunoreactive cells and in a subset of the somatostatin cells. The basic islet structure is very similar to other rodents - with the insulin cells in the center, and glucagon, somatostatin, PP and occasional PYY cells in the periphery. No ghrelin or CART cells were identified. Nkx6.1 was localized specifically to the insulin immunoreactive cells, while Nkx2.2 was found in all endocrine cells except the somatostatin immunoreactive cells. Both MafA and MafB were expressed in the islets; MafA being specific for the insulin cells, while MafB was primarily in the glucagon cells but also found in some insulin cells. Isl-1 was localized in all endocrine cell types. In conclusion, the closest relatives to the Gerbils express a Pdx-1 protein that is 90% similar to other rodents but also has a unique 3 amino acid insert compared to other species. During the evolution of the spiny mice and the gerbils, it appears that the Pdx-1 gene was lost.
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http://dx.doi.org/10.4161/isl.1.3.9557 | DOI Listing |
Insects
January 2025
Systematic Entomology Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD 20705, USA.
A new genus for the tribe Pseudotarsonemoidini of the family Tarsonemidae is established in order to accommodate undescribed mites associated with bark beetles in Mexico. The new, monotypic genus , with the type species being diagnostically and phylogenetically closest to the derived - cluster of the Pseudotarsonemoidini, possesses an intermediate position between these two genera. Details of the morphology related to its genus-level affiliation, primarily tibiotarsal I claw and leg setation, are compared in the context of the other genera of the tribe.
View Article and Find Full Text PDFGenes (Basel)
December 2024
Hainan Key Lab of Tropical Animal Reproduction, Breeding and Epidemic Disease Research, Animal Genetic Engineering Key Lab of Haikou, Hainan University, Haikou 570228, China.
This research aims to enhance the genomic database of by identifying virulence genes through the whole genome sequencing and comparative analysis of a goat-derived (KOHN1) strain, while clarifying the relationship between its genetic evolution and virulence, ultimately providing a theoretical foundation for clinical prevention and diagnosis. Third-generation Oxford Nanopore Technologies (ONT) sequencing and second-generation Illumina sequencing were used to sequence the strain and analyze the database annotations. Screening for 10 virulence genes was conducted using PCR.
View Article and Find Full Text PDFPLoS One
January 2025
Department of Entomology and Plant Pathology, NC State University, Raleigh, North Carolina, United States of America.
We examined the evolutionary history of Phytophthora infestans and its close relatives in the 1c clade. We used whole genome sequence data from 69 isolates of Phytophthora species in the 1c clade and conducted a range of genomic analyses including nucleotide diversity evaluation, maximum likelihood trees, network assessment, time to most recent common ancestor and migration analysis. We consistently identified distinct and later divergence of the two Mexican Phytophthora species, P.
View Article and Find Full Text PDFIn recent years, DNA metabarcoding has been used for a more efficient assessment of bulk samples. However, there remains a paucity of studies examining potential disparities in species identification methodologies. Here, we explore the outcomes of diverse clustering and filtering techniques on data from a non-destructive metabarcoding approach, compared to species-level morphological identification of Brachycera (Diptera) and Hymenoptera of two bulk samples collected with Malaise traps.
View Article and Find Full Text PDFNat Microbiol
January 2025
Université Paris Cité, CNRS, Institut Jacques Monod, Paris, France.
The evolution of eukaryotes is a fundamental event in the history of life. The closest prokaryotic lineage to eukaryotes, the Asgardarchaeota, encode proteins previously found only in eukaryotes, providing insight into their archaeal ancestor. Eukaryotic cells are characterized by endomembrane organelles, and the Arf family GTPases regulate organelle dynamics by recruiting effector proteins to membranes upon activation.
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