Download full-text PDF |
Source |
|---|---|
| http://dx.doi.org/10.1177/000348941011901012 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Learning the language of antibody hypervariability.
Proc Natl Acad Sci U S A
January 2025
Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139.
Protein language models (PLMs) have demonstrated impressive success in modeling proteins. However, general-purpose "foundational" PLMs have limited performance in modeling antibodies due to the latter's hypervariable regions, which do not conform to the evolutionary conservation principles that such models rely on. In this study, we propose a transfer learning framework called Antibody Mutagenesis-Augmented Processing (AbMAP), which fine-tunes foundational models for antibody-sequence inputs by supervising on antibody structure and binding specificity examples.
View Article and Find Full Text PDFOn the infodynamics of ramifications in constructal design.
Biosystems
January 2025
University of Coimbra, ADAI, LAETA, Polo II, Rua Luis Reis Santos, Coimbra, 3030-788, Portugal. Electronic address:
Infodynamics is the study of how information behaves and changes within a system during its development. This study investigates the insights that informational analysis can provide regarding the ramifications predicted by constructal design. First, infodynamic neologisms informature, defined as a measure of the amount of information in indeterminate physical systems, and infotropy-contextualized informature representing the degree of transformation of indeterminate physical systems-are introduced.
View Article and Find Full Text PDFMaternal effects in the model system Daphnia: the ecological past meets the epigenetic future.
Heredity (Edinb)
January 2025
Department of Biological Sciences, University of South Carolina, Columbia, SC, USA.
Maternal effects have been shown to play influential roles in many evolutionary and ecological processes. However, understanding how environmental stimuli induce within-generation responses that transverse across generations remains elusive, particularly when attempting to segregate confounding effects from offspring genotypes. This review synthesizes literature regarding resource- and predation-driven maternal effects in the model system Daphnia, detailing how the maternal generation responds to the environmental stimuli and the maternal effects seen in the offspring generation(s).
View Article and Find Full Text PDFComputational prediction of novel two-dimensional tungsten nitride superconductors.
J Phys Condens Matter
January 2025
Escuela de Artes Plásticas y Audiovisuales, Benemerita Universidad Autonoma de Puebla, Av. San Claudio y Blvd. 18 Sur, Edificios 1IF1, 2IF1 y 3IF1, Ciudad Universitaria, Colonia San Manuel, Puebla, Puebla, 72570, MEXICO.
Transition metal nitrides are well-known 3D superconductor materials. However, there is a lack of knowledge related to their two-dimensional (2D) counterparts, which have several potential technological applications. In this work, we predict, using an evolutionary algorithm coupled with a first-principles approach, a set of novel 2D superconductive structures based on tungsten nitride.
View Article and Find Full Text PDFPhotolithographic Microfabrication of Microbatteries for On-Chip Energy Storage.
Nanomicro Lett
January 2025
State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, People's Republic of China.
Microbatteries (MBs) are crucial to power miniaturized devices for the Internet of Things. In the evolutionary journey of MBs, fabrication technology emerges as the cornerstone, guiding the intricacies of their configuration designs, ensuring precision, and facilitating scalability for mass production. Photolithography stands out as an ideal technology, leveraging its unparalleled resolution, exceptional design flexibility, and entrenched position within the mature semiconductor industry.
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!