SSO2064 is the first structural representative of PF01796 (DUF35), a large prokaryotic family with a wide phylogenetic distribution. The structure reveals a novel two-domain architecture comprising an N-terminal, rubredoxin-like, zinc ribbon and a C-terminal, oligonucleotide/oligosaccharide-binding (OB) fold domain. Additional N-terminal helical segments may be involved in protein-protein interactions. Domain architectures, genomic context analysis and functional evidence from certain bacterial representatives of this family suggest that these proteins form a novel fatty-acid-binding component that is involved in the biosynthesis of lipids and polyketide antibiotics and that they possibly function as acyl-CoA-binding proteins. This structure has led to a re-evaluation of the DUF35 family, which has now been split into two entries in the latest Pfam release (v.24.0).

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2954200PMC
http://dx.doi.org/10.1107/S1744309110002514DOI Listing

Publication Analysis

Top Keywords

reveals novel
8
novel two-domain
8
structure sso2064
4
sso2064 representative
4
representative pfam
4
family
4
pfam family
4
family pf01796
4
pf01796 reveals
4
two-domain zinc-ribbon
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!